| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppro_0527 |
|---|
| Symbol | |
|---|
| ID | 4572709 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelobacter propionicus DSM 2379 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008609 |
|---|
| Strand | - |
|---|
| Start bp | 560756 |
|---|
| End bp | 562120 |
|---|
| Gene Length | 1365 bp |
|---|
| Protein Length | 454 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 639754564 |
|---|
| Product | tRNA (uracil-5-)-methyltransferase Gid |
|---|
| Protein accession | YP_900216 |
|---|
| Protein GI | 118578966 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG1206] NAD(FAD)-utilizing enzyme possibly involved in translation |
|---|
| TIGRFAM ID | [TIGR00137] tRNA:m(5)U-54 methyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.00436331 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAACACT CCCTCACCAT CATCGGCGCC GGCCTGGCAG GCTGCGAGGC CGCTTGGCAG
GCCGCGCGGC GCGGCGTCAG CGTCACCCTG CACGAAATGA AGCCCGAAAA GCGCTCTCCC
GCCCACCATC TCCCCGGGCT GGCCGAACTG GTCTGCTCCA ACTCCCTGCG GGGCGATTCC
CTGGAAAACG CCGTAGGGCT CTTGAAGGAA GAGCTCAGGC GCGGCGGCTC CCTAATCATG
GAGGCCGCCG AGGCCACCCG CGTCCCGGCC GGCGGAGCCC TGGCGGTGGA CCGCCAGCTC
TTCTCCGACT ATGTCACGGC AAAGATCACG GCGCATCCCC TGATCAACCT GGTGCATGGC
GAAATGGATG CCATCCCCGC CGAGGGGACG GTGATCATCG CCTCCGGCCC CCTGACCAGC
GACGCCCTGG CCGCCTCCCT CTCCGGCCTG ACCGGCGACC GGCTCTACTT CTACGATTCC
ATCGCCCCCA TCGTCACGGC GGATTCCCTG GACCGGGAGA AAGTCTTCGC GGCGTCGCGC
TACGGCAAGG GGGACGGCGA CGACTACCTC AACTGCCCCC TGGACCGGGA GCAGTACCAG
GCCTTTGTGG AGCAGCTAAA CAGGGGGGAG AAGGTAGCGG CACGCGAGTT CGAGAAGCTC
GTGCACTTCG AGGGATGCAT GCCGGTGGAG GAACTGGCCG GGCGGGGGGA GGACACGCTC
CGCTTCGGCC CCATGAAACC GGTGGGCCTG ACGGATCCCC GCACGGGCAT CGAACCGCAC
GCGGTGATCC AGCTGCGCGC CGAGAACCGG GAGAAAACCA TGTACAACCT GGTCGGCTTC
CAGACCAAGC TGACCTGGCC GGAACAGCGC CGCATATTCA GGACCATACC GGGGCTGGAG
CGAGCCGAGT TCGTGCGGCT CGGGTCCATG CACCGCAACA CCTTCATCAA CGCCCCTGCC
CTGCTCCAGC CGACCCAGCA GCTGAGGAGC GATCCGCGCA TATTCTTCGC AGGCCAGATC
ACCGGCGTTG AGGGGTACGT GGAATCGGCG GGGAGCGGCT TTTTGGCCGG CATCACCGCC
GCCCGCCTGC TCACGGGGAT GCCGGACCCG GCCGTGCCCC CTGCCGAGAC CGCACTGGGC
GCCTTGGTCA GCCACATCAC CAATGCCGAT GTGCGCCACT TCCAGCCCAT GAACGTGAAC
TACGGCCTGT TCCCCGATCT GGAGGGACGG ATCAAGAAAA AGGAGCGGCG CGGCAAACTG
GCCGAGCGGG CCCTGGCCTC CCTGTCGGGC TGGTTGGAAC GGGTATCCCC CCCGAGCCGG
GAGACGGGAG AGCCGACCGG GGCGGAGCAG GTTGATCTCG CCTGA
|
|---|
| Protein sequence | MKHSLTIIGA GLAGCEAAWQ AARRGVSVTL HEMKPEKRSP AHHLPGLAEL VCSNSLRGDS
LENAVGLLKE ELRRGGSLIM EAAEATRVPA GGALAVDRQL FSDYVTAKIT AHPLINLVHG
EMDAIPAEGT VIIASGPLTS DALAASLSGL TGDRLYFYDS IAPIVTADSL DREKVFAASR
YGKGDGDDYL NCPLDREQYQ AFVEQLNRGE KVAAREFEKL VHFEGCMPVE ELAGRGEDTL
RFGPMKPVGL TDPRTGIEPH AVIQLRAENR EKTMYNLVGF QTKLTWPEQR RIFRTIPGLE
RAEFVRLGSM HRNTFINAPA LLQPTQQLRS DPRIFFAGQI TGVEGYVESA GSGFLAGITA
ARLLTGMPDP AVPPAETALG ALVSHITNAD VRHFQPMNVN YGLFPDLEGR IKKKERRGKL
AERALASLSG WLERVSPPSR ETGEPTGAEQ VDLA
|
|---|
| |