Gene Ppro_0453 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpro_0453 
Symbol 
ID4572981 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter propionicus DSM 2379 
KingdomBacteria 
Replicon accessionNC_008609 
Strand
Start bp476581 
End bp477432 
Gene Length852 bp 
Protein Length283 aa 
Translation table11 
GC content62% 
IMG OID639754491 
Productapurinic endonuclease Apn1 
Protein accessionYP_900143 
Protein GI118578893 
COG category[L] Replication, recombination and repair 
COG ID[COG0648] Endonuclease IV 
TIGRFAM ID[TIGR00587] apurinic endonuclease (APN1) 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.00920847 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCTGATT ATCTTGGCGC CCACATGTCC ATAGCAGGCG GCCTGCACCG GGCCATTGAC 
CGCGCCATGG CGACCGGTTG CGGCGTGCTG CAGATCTTTA CCCGCAACTC CAATCAGTGG
AAGGAAAAGA CGCTGAGTGA TGCCGATGTG GCCCTGTTCA GGGAGAAATT CGCGGCTTCC
GGCCTGCGCG AGGTGATCTC CCACGACATC TACCTGATCA ACCTGGCTTC CGCTCCGGGG
GAGGTTCGCG ACAAGAGCCT GGCGGCCTTC CGGGACGAAC TAGAGACCTG TGCCCGACTA
GGCATCGACA GGGTGGTCAT GCACCCCGGA TCGCATCTGT CCGACAGTCC GGAAGCTGCT
CTGACGCGGG TGAGCCAGGC CTTCGACCGG CTCTTCCAGG AGGTGCCGCT CTTCCAGGGA
AGGGTGCTGC TGGAGACAAC CGCCGGCCAG GGGACCAACC TGGGGCGGAA CTTTCAGGAG
CTGCGGACTA TTATCGACGG TTGCCGTTAT CCGGAGCGTT TCGGGGTCTG CTTCGACACC
TGCCACACCT TCGCCGCCGG CTACGACATC ACCAGCGAAG AGGGGTACCG CTCCACCAAG
GAAGAATTCG ACCAAATCAT CGGGCTCGAC CGACTGGAAT GCTTCCACTT CAACGACTCC
AGGAAAGGGC TCGGCTCACG GGTGGACCGC CACGAGCACA TAGGCCAGGG CATGCTGGGG
CTCAACCCCT TCCGTTTCAT CTTGAACGAC CAGCGCTTCG CCACGACGCC CAAGATCCTG
GAAACCCCCA AGGGGGACAA TGACGAGATG GACGGGATCA ACCTGGGGCT CCTGCGGGGG
CTGGTGACCT GA
 
Protein sequence
MPDYLGAHMS IAGGLHRAID RAMATGCGVL QIFTRNSNQW KEKTLSDADV ALFREKFAAS 
GLREVISHDI YLINLASAPG EVRDKSLAAF RDELETCARL GIDRVVMHPG SHLSDSPEAA
LTRVSQAFDR LFQEVPLFQG RVLLETTAGQ GTNLGRNFQE LRTIIDGCRY PERFGVCFDT
CHTFAAGYDI TSEEGYRSTK EEFDQIIGLD RLECFHFNDS RKGLGSRVDR HEHIGQGMLG
LNPFRFILND QRFATTPKIL ETPKGDNDEM DGINLGLLRG LVT