| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppro_0444 |
|---|
| Symbol | |
|---|
| ID | 4572955 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelobacter propionicus DSM 2379 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008609 |
|---|
| Strand | - |
|---|
| Start bp | 465571 |
|---|
| End bp | 467541 |
|---|
| Gene Length | 1971 bp |
|---|
| Protein Length | 656 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 639754483 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_900135 |
|---|
| Protein GI | 118578885 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1916] Uncharacterized homolog of PrgY (pheromone shutdown protein) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCTCGGC GTCTCTACCT GGAACGCTTC GGTCCCGTTC ACGCCCTGCC GGTGTTGCAC
TACCGCATGG AGTTCGCGCA CCTGGTGCGC ATGGCCTTCG AGCAGGTCAG ACCCCAGGCG
GTGGCGGTGG AACTGCCCCC CACCCTGGAA GAGCCTTTCC TGCGGGGAGT ACGGCGCCTG
CCGCAGGTTT CGGTGATCAG CTACCGGATC GACCCGAAGA TAGGCAAGGC ACAGGGAGAA
ACTGCCTACC TGCTGCTGGA GCCTGCTGAC CCGCTGGTGG AGGCGGGCCG GATGGCACTG
GAGCGGGATA TTCCGCTGCA CTTCATCGAT GTGGATACGG ACGTCTACCC CCGCCACCAG
GAGCGGCTCC CCGATTCCTA CAGCATCTGC CGCATCGGCC TCAAGACCTA CTATCGTGAA
TATCTGAAGG TTTCAGCCGA GTTCCCCCAC TGCAAAGAAG ACCTGCGCCG GGAACAGGGG
ATGGCCTTCC GCCTGAAGCA ACTGGCCGAA CGGTACGAAC GAATCCTCCT CATCTGCGGC
ATGGCCCATC TTGAACGGAT CCGGCAACTC TTCTCCACAC CCTTGGCAGC GCCCCTGGAG
CGCATCCGGC GGGAGGGGGT CAGTCTCTGG AACCTGCATC CCGATTCCTG CCGGGAGATC
TTGGCGGAAT TCCCCTTCCT CTCGGCGGTC TACGAACAGC GCCGCGGACC ACTCCCCGAG
GAGCCGCGGG AGAGCGGCTC CGGGCTGCGC AAACGCTTCC ATGCCCTGGA GCTGATCAAC
GGCGGCAGGC AGGAGCTTTC CGAAGAACAG CTCCTGGGCA ACGCCATCCA GCGCAGCGCC
CGCCACCTGG GACAGAAGGG GCTGTTTCCG GACCGGCAGC GCATCATCTA CCAGCTCTTC
TGCGAGGCTG GCCGCCACTA TCGCCAGGAA ACCGGCGAAA GCGTCTCCCT CTGGCAGAAG
CGGGCCTTCT TCCGCTTTGC GCGCAATCAG GCCCTGGCCG GTGGCCAGTT GATGCCGGAC
CTGTTCCAGA TCCTGGCAGC CGGGCGCGGT TGCGTTGATG ACAACTTCGC CCATGCACTC
TGCCGCCTGG CCACCCACTA CCCCTGGCAG TCAGAAACCA GTGACCTGGC CACCATCCGC
ATCTCTCCCG AGGATTTGTG GGGCGATGTG CGCCGGATCC GCTTCCGTCC ACGTCAGAAA
CGGCGCAAGG GGCTCTCGTC GTTCGGCTTT CTCAAGCGCA AACGGGAGCG CCGGCCCGGC
GAATGGCTGG AAGGGTTCGA CGATCCGTCC ATCTGCTCCT ACCCGCCGGA AGATCTGGCC
CTGGAGGAGT ACGGCCGTTT CCTCAAGCAC AAGGGGTGCC TGCAGCTCTC CCAGGAGCAG
AGCCGCAGCG AAAAATTCAG CACCTCGCTT CTGGACGGCA TCGACCTGCG GGAAACCATG
CGCAACCTGC ACGAGGGGGG TATCTACGTC AGGGAACAGC GACGGATCAG GGGCGGGGTC
GGCTCCCTGG TGGTGATCTT CAACGAGGAC CGCCATGGCA AGGGCTACCC CTATCGCATG
ACCTGGCTGG GGGAGCACGA GCAGGAATCT GACATGGCCT TCTATGCCAC CGACCCGACG
GAGAACGTGG TCGGCCCGGG CATCTGCCGC TGCGAATACG GCGGCTTCAT GCTCTCCTAT
CCGCCACGGC GCATGCTGGA TGTGTGGCAT GATCCGGAGT ATTGCACAGC CACTACCCGT
GCGGAACTGC TGCTGATGGC GGCACTGGAC TACTCCCTGG AGCGCCATGT GATCTACGTG
GCGGCCCGGC CTCCTCGCAG CATCTTCAGG CAACTGGCGG CCCGCATGGA CCGCACCATC
GTCTTCATCC CGCTGGGCTC TCTATCGCCC CTCAAGCTGA AACAGATACG CATCATGCAT
ATCCTGGCCG GCAGGGACAA ACGGCCCATT GCCCGGGAGT ACATCTGGTG A
|
|---|
| Protein sequence | MPRRLYLERF GPVHALPVLH YRMEFAHLVR MAFEQVRPQA VAVELPPTLE EPFLRGVRRL
PQVSVISYRI DPKIGKAQGE TAYLLLEPAD PLVEAGRMAL ERDIPLHFID VDTDVYPRHQ
ERLPDSYSIC RIGLKTYYRE YLKVSAEFPH CKEDLRREQG MAFRLKQLAE RYERILLICG
MAHLERIRQL FSTPLAAPLE RIRREGVSLW NLHPDSCREI LAEFPFLSAV YEQRRGPLPE
EPRESGSGLR KRFHALELIN GGRQELSEEQ LLGNAIQRSA RHLGQKGLFP DRQRIIYQLF
CEAGRHYRQE TGESVSLWQK RAFFRFARNQ ALAGGQLMPD LFQILAAGRG CVDDNFAHAL
CRLATHYPWQ SETSDLATIR ISPEDLWGDV RRIRFRPRQK RRKGLSSFGF LKRKRERRPG
EWLEGFDDPS ICSYPPEDLA LEEYGRFLKH KGCLQLSQEQ SRSEKFSTSL LDGIDLRETM
RNLHEGGIYV REQRRIRGGV GSLVVIFNED RHGKGYPYRM TWLGEHEQES DMAFYATDPT
ENVVGPGICR CEYGGFMLSY PPRRMLDVWH DPEYCTATTR AELLLMAALD YSLERHVIYV
AARPPRSIFR QLAARMDRTI VFIPLGSLSP LKLKQIRIMH ILAGRDKRPI AREYIW
|
|---|
| |