| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppro_0411 |
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| Symbol | |
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| ID | 4573040 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelobacter propionicus DSM 2379 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008609 |
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| Strand | + |
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| Start bp | 424910 |
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| End bp | 428131 |
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| Gene Length | 3222 bp |
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| Protein Length | 1073 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 639754450 |
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| Product | hydrophobe/amphiphile efflux-1 (HAE1) family protein |
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| Protein accession | YP_900103 |
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| Protein GI | 118578853 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTTCCA AGTTTTTCAT CGAACGGCCG ATCTTCGCCA CGGTCATCTC CCTGATCATC
GTCATCGCCG GCCTGGTGGC GATGAAGGCC CTGCCGGTGG CCCAGTACCC CACCATCACG
CCGGTGACGA TCCAGGTGAC GACCACCTAT CCCGGCGCCG ACTCCAAGAC GGTGGGTGAC
TCGGTGGCCG CCCCCATCGA GGCGCAGATC AATGGTGCCG ACAACCTGCT CTACATGACC
TCAACCAGCT CCAATACCGG TCAGATGACC ATCACCGCCT ACTTCGCCCT CAATGTCGAT
CCTGATATCG CCCAGGTGGA CGTGCAGAAC CGGGTCAACC TAGCCATGCC CCAGCTCCCC
GATGCGGTCA AGACGTACGG CGTCTCGGTG CAGAAAAAAT CGTCAAGCCC CCTGATGATC
ATTTCGCTCT ACAACAAGGA CGGCCGCTAC ACACCGGAGT ATGTGAACAA TTACGCCAAT
GTCTACGTGC TGGATGCCAT CAAGCGGGTC AACGGGGCCG GACAGGCCCA GATTTTCGGC
GTGCCGGACC AGGCCATGCG CATCTGGATG AACCCGGACC GCATGGCATC TCTCGGCATC
ACCACCAGCG ACATCCAGAA TGCGGTGGCC AAGCAGAATG CCCTGTTCGG GGCCGGACAG
GTCGGTTCCC AGCCCAGCGA CAAGTCGGTG CAGCTGACCT TTCCGGTGGT GACCCAGTCG
CCCTTTGTCA AGCCCTCGGA ATATGAGAAT ATCATCCTGC GCGCCAGCCA GGACGGCAGC
GCCATCGTGC GCATCAGGGA CGTGGCCCGC GCCGAGACCG GCCGGCGCCA GTACATCGAC
GACAACCGGT TGAACGGCTA TCCCTGTGCG CCGATCATCG TCTACCAGCA GGCCGGCGCC
AATGGGCTGG AAGTGTCCAA GGGGGTGCGC AAAGTCATGG AGGATCTGAA GAAGACCCTT
CCCGCCGGCA TCGAGTACAC CATCTCCCTT GATACCACCG AATTCGTGCG TCTCTCCATC
GAGGAGGTCA TCCACACCCT GTTCGAGGCC ATCGTGCTGG TCATCCTGGT GGTCTATCTC
TTCCTGCAGA GCTTCCGCTC CACCATCATC TGTACGGTGG CAGTCTTCGT CTCGCTGATC
GGTACCTTCG CCGGCATGCT GGCAATGGGG TTCTCCATCA ACCTGCTGAC CCTGTTCGGC
ATCGTGCTGG CCATCGGCAT GGTGGTCGAC GACGCCATTG TGGTGGTGGA GAACGTGGAA
AGCAACATGA TCAAGAAGCA CCTTCCTCCC AAGGAAGCCA CCATCCTGGC CATGGAGCAG
ATCGGCACCT CCCTGATCGC GGTGGTGCTG GTCATGGCGT GCGTCTTCAT TCCGGCGGCC
TTCCTCCCCG GCACCACCGG ACAGCTCTAC AAGCAGTTCG CCATCACCAT CGTTGTGTCC
GTGGCCCTGT CCGGTTTCGT TGCCCTGACC CTGACCCCGG CCATGTGCGG CTTCATGCTC
AAGCACAACC CGCCCCCCCA GAAGGGGTTC TTCGCCTGGT TCAACCGCAT GTTCGACACG
TTCACCCTGA AATTCGGTGA CGCCGTGGTG CTGATGATCA AGCGCATGAC CGTGGCCTTC
GTGCTGCTGG CCGTGATGAT GTTCGGCCTG GTGCACCTGT TCAAGACCAT CCCCACCAGC
TTCGTCCCCA ATGAGGACCA GGGCTACATC TTCACGCAGA TCATGATGCC GGATGCTGCC
AGCCTGAACC GTACCTCGGA GATGGCCATG AAGGTGGACG CGCTGTTCGC CAAGAACCCG
GCGGTGGAGA ACCGGACCAT GATCGGCGGC TACAGCCTGA TCGACAGCCA GTACAAGCCC
AACGTTTCGA CCTTCTTCGT CACGCTCAAG GATTTCAAGG AACGCTATTC ATCCGGGGAT
CGCGCCAAGA AGGAGAACGC TGAGGCCGTG CTGAAGCAGA TCGGGGGGGC CGCACGCACC
ATCAAGGATG GGGTAACCAT CCCCATCGCC CCGCCGGCGA TTCCTGGTAT CGGCACCACC
GGCGGCTTCG AGTTCTGGAT CCAGGATAAG GGGAGCGGCG AGCCGGCCCG CCTGTACGAG
GCCACCCAGC AGTTCCTGGC CAAGGCGCGC CAGCGCCCCG AACTGACCGG GCTGAACACC
ACCTTCCGCG CCGCCTCCCA GCAGCTGAAG GCCGAGGTTG ACCGCTCCAA GGCCGTGCTC
TTGGGGGTGC CGGTGGAGGA TGTGTACAGC GCCCTGCAGG CCCAGTTTGG TTCGATCCAG
GTCAGCCAGT TCAACCAGTA CAGCAGGGTC TGGAACGTCA TCCTCCAGTC CGATGCCCCC
TACCGCCGCA CCCCCGCGGA CATCACCCGG CTCTACACCC GCTCCACCAC CGGCCAGATG
GTGCCGCTGT CAGCCGTGGT CAACACCAGT TACGTGACCA ACCCCGACCT GGTGCCCCAC
TTCAACGGCT TTCCGGCCGC CCAGGTCACC GGCAACGCCC AGGCGGGATT CAGCTCGGGC
GAGGCCATCA AGGCCATGGA AGAGGTGGCG ACGGAAGTTC TTCCCCAGGG GTACAGCTTT
GCTTGGTCGG GCATGGCCTA CGAGGAGAAG AAATCAGGCG GCACCTCCGC CGCTGCCTTC
GCCTTCGGCC TGGTTATCGT CTTCCTCCTG CTGGCGGCCC AGTTCGAATC CTGGACCCTG
CCCGGCTCGG TCATGACGGC CGTTCCCTTC GGCATCCTGG GCGCCCTGAT GTTCAACTGG
ATGCGGGGCT TGAGCAACGA CGTCTACTTC CAGATCGGCC TGCTGGTTCT GATCGGCCTG
GGAGCCAAGA ACGCGGTCCT GCGGGTGACC TTTGCCGTGG AACTGCGGGA ACAGGGGCTC
TCCATCATGG ACGCCACGGT GCGGTCAGGC GAGGAGCGCT TCCGCCCCAT CATCATGACC
TCCCTGGCCT TCATCTTCGG CGTACTGCCG CTGGCCATCG CCACCGGCGC CGGCGCCAAC
GCCCGACACT CCATCGGTAC CGGCATCATG GGGGGGATGA TCGGCGAGGC AACCCTGGCC
ATGCTGTACG TGCCGCTCTT CTTCTATATC TTTGACAATC TGACCGAGCG TAACAAGGAG
AAGAAAGCGA AGAAAGCGGC GGCCGAAGGG CGTCCGCCGG ACACGCCGCA GGTGGCGAGC
CTGACCGAGA GCCATGATAT CCACCGGGAA GGGGGTAACT GA
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| Protein sequence | MFSKFFIERP IFATVISLII VIAGLVAMKA LPVAQYPTIT PVTIQVTTTY PGADSKTVGD
SVAAPIEAQI NGADNLLYMT STSSNTGQMT ITAYFALNVD PDIAQVDVQN RVNLAMPQLP
DAVKTYGVSV QKKSSSPLMI ISLYNKDGRY TPEYVNNYAN VYVLDAIKRV NGAGQAQIFG
VPDQAMRIWM NPDRMASLGI TTSDIQNAVA KQNALFGAGQ VGSQPSDKSV QLTFPVVTQS
PFVKPSEYEN IILRASQDGS AIVRIRDVAR AETGRRQYID DNRLNGYPCA PIIVYQQAGA
NGLEVSKGVR KVMEDLKKTL PAGIEYTISL DTTEFVRLSI EEVIHTLFEA IVLVILVVYL
FLQSFRSTII CTVAVFVSLI GTFAGMLAMG FSINLLTLFG IVLAIGMVVD DAIVVVENVE
SNMIKKHLPP KEATILAMEQ IGTSLIAVVL VMACVFIPAA FLPGTTGQLY KQFAITIVVS
VALSGFVALT LTPAMCGFML KHNPPPQKGF FAWFNRMFDT FTLKFGDAVV LMIKRMTVAF
VLLAVMMFGL VHLFKTIPTS FVPNEDQGYI FTQIMMPDAA SLNRTSEMAM KVDALFAKNP
AVENRTMIGG YSLIDSQYKP NVSTFFVTLK DFKERYSSGD RAKKENAEAV LKQIGGAART
IKDGVTIPIA PPAIPGIGTT GGFEFWIQDK GSGEPARLYE ATQQFLAKAR QRPELTGLNT
TFRAASQQLK AEVDRSKAVL LGVPVEDVYS ALQAQFGSIQ VSQFNQYSRV WNVILQSDAP
YRRTPADITR LYTRSTTGQM VPLSAVVNTS YVTNPDLVPH FNGFPAAQVT GNAQAGFSSG
EAIKAMEEVA TEVLPQGYSF AWSGMAYEEK KSGGTSAAAF AFGLVIVFLL LAAQFESWTL
PGSVMTAVPF GILGALMFNW MRGLSNDVYF QIGLLVLIGL GAKNAVLRVT FAVELREQGL
SIMDATVRSG EERFRPIIMT SLAFIFGVLP LAIATGAGAN ARHSIGTGIM GGMIGEATLA
MLYVPLFFYI FDNLTERNKE KKAKKAAAEG RPPDTPQVAS LTESHDIHRE GGN
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