Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppro_0330 |
Symbol | |
ID | 4573096 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelobacter propionicus DSM 2379 |
Kingdom | Bacteria |
Replicon accession | NC_008609 |
Strand | - |
Start bp | 329214 |
End bp | 332378 |
Gene Length | 3165 bp |
Protein Length | 1054 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 639754368 |
Product | hydrophobe/amphiphile efflux-1 (HAE1) family protein |
Protein accession | YP_900022 |
Protein GI | 118578772 |
COG category | [V] Defense mechanisms |
COG ID | [COG0841] Cation/multidrug efflux pump |
TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTCAGT TTTTCATCGA TCGCCCCATC TTCGCCTGGG TGATCGCCAT CATCATCATG CTGGCCGGCA TACTGGCCAT CAAGCAGCTC CCCGTTGCCC AGTATCCGGC CATCGCCCCA CCCCAAGTGT CCATCAACGC CACCTATCCG GGCGCATCGG CCAAAACCAT TGAGGATACG GTCACCCAGG TCATCGAGCA GAAGATGAAC GGCATCGACA ACCTGACCTA CATGTCCTCC ACCAGCGATT CAAGCGGCAG TGTCACCATC ACCCTGACCT TCAACGCCGG CACCGACCCG AACATCGCCC AAGTGCAGGT GCAGAACAAG CTGCAGCTGG CAACGCCGCT CCTGCCCCAG GCGGTGCAGC AGCAGGGTAT CAAGGTCACC AAGTCAACCA AGAACTTCCT GATGGTGGTC GGTTTCGTCT CCGAAGACGG CAGCATGACC CGCTTCGATC TGTCCGACTA TGCGGCGGCC AACGTTTTGG ACATCGTCAG CCGTCTGCCG GGGGTGGGTG AAACCCAGAT GTTCGGCTCC CAGTACGCCA TGCGCATCTG GCTCGACCCC CACAAGCTGC ATAACTACAA CCTGACCCCG AATGACGTAA AGAGCGCCAT CAAGGCCCAA AACGTCCAGG TTTCCGCCGG GCAGCTGGGG GGCAACCCCT CTCCCCAGGG ACAGCAGCTC AACGCCACCA TCACGGCCCA GACCCTGCTC AAGACCCCGG AGGAGTTCGG AGCCATCATC CTGCGCACCA ACAGCGACGG CTCCAGCGTC CATCTGCGCG ACGTGGCCCG CAGCGAACTG GGCAGCGAAG ACTACTCTTC CATGGCCCGC TTCAACGGCA AGCCGGCCGC CGGCATGGCC ATCAAGCTGG CCACCGACGC CAATGCCCTG GATACCGCTA AAGTAGTCAA GGACAAACTG GCCGAACTGT CCAAGTTCTT CCCCAGCGGC ATGAAGGTGG TCTACGCCTA CGACACCACC CCATTCGTCA AGATCTCCAT TGAAGAGGTG GTCAAGACAC TGGGTGAGGC GGTCGTGCTG GTCTTCCTGA TCATGTTCCT GTTCATGCAG AACATCCGCG CCACCCTGAT CCCCACCATC GCCGTGCCGG TGGTTCTGCT GGGCACCTTC GGCGTGTTGT CCGCCTGCGG TTTTTCCATC AACACCCTGA CCATGTTCGC AACCGTCCTG GCCATCGGCC TGCTGGTGGA CGACGCCATC GTGGTGGTGG AGAACGTGGA GCGCATCATG ACCGAGGAGG GGCTCTCCCC CAAGGAGGCC ACCCGCAAAT CAATGCGTCA GATCACCGGC GCCTTGGTGG GCATCGCCCT GGTCCTGTCG GCGGTGTTCG TCCCCATGGC CTTCTTCAGC GGCTCCACCG GCGTGATCTA CCGCCAGTTC TCCATCACCA TCGTCTCGGC CATGGTGCTC TCCGTACTGG TGGCCATGAC CCTGACCCCG GCCCTCTGCG CAACCCTGCT CAAGCCGGTA GAGAAGGGGC ATGTGGCGGC TGACAGCGGC TGGTTCTCCG GCTTCTTCCG CTGGTTCAAC GCATGGTTCG ACCGTGGCAG GGAAAAGTAC GAGGAGATGG TGGGGCGCTC CTTCGGTAAA CCGGTGCGCT ACCTGGTGGT TTATGGCGCC ATCGTGACCG CCATGGTGCT CTTCTTCCTG CGCATGCCCA CTGCCTTCCT GCCCGACGAG GACCAGGGCA TGCTCTTCTC CATGGTACAG CTGCCGGTGG GCGCCACCCA GGAGCGCACC CTGGAGGTGC TCAAGGATGT GGAAAACCAC TTCCTGGTCG ACCAGAAGGA AGCGGTGGAA TCGCTGTTCA CCGTGGCCGG CTTCAGTTTT GCCGGCAACG GCCAGAACAT GGGTCTGGCA TTCGTCAAGC TCAAGGACTG GGAGTTGCGC CAGCGCCCCG ACCTACGGGT CAAGGCGGTG GCCGGCAAGG CCATGGCGGC CTTCTCAGGC TTCCGCGACG CCCAGGCCTA TGCCTTCGCC CCCCCGGCGG TCATGGAACT GGGCACCTCA AACGGTTTCG ACTTCCAGCT ACAGGACCGG GGAGGATTGG GGCATGAAAA GCTGATGGAG GCCAGAAACC AGCTGCTGGG CATGGCGGCC CAGAATCCCA ACCTGATGGC GGTGCGGCCC AACGGCCAGG ATGACACCCC CCAGTTCAGG CTGGACATCG ATCAGGCCAG GGCCGAGGCC TACGGCCTCT CCATCTCCGA CATCAACGAC ACCATCTCCA CCGCCTGGGG CAGCTCCTAT GTCAACGACT TCGTCGACCG GGGCCGCACC AAGAAAGTCT ATATCCAGGG AGACGCACCC TACCGCATGC TCCCTGAAGA CGTGAACAGA TGGCATGTGC GCAACGCGGC CGGGACCATG GTCCCCTTCT CGGCCTTTGC CTCGGGTCAC TGGAGCTATG CTTCCCCGCG CCTGGAACGC TACAACGGAC TCCCCTCCAT GGAGATCCTG GGGCAACCGG CGCCTGGCAA GAGTACCGGT GTGGCCATGG CCGAGATGGA GAAGATGGCG GAAAAGCTGC CGGCCGGTAT CGGCTTCGAG TGGACCGGAC TTTCCTACCA GGAACGCCAG GCCGGCGCCC AGGCCCCAGC CCTGTACGCC ATTTCACTCA TTGTTGTCTT TCTCTGCGTG GCCGCCCTGT ATGAGAGCTG GACCATCCCC TTCGTCAACA TACTGATGCT GCCGCTGGGT ATCGTCGGGG CCGTCATGGC AACAACCGCA CGCGGGCTGT CAAACGACAT CTATCTGCAG ATCGGCCTGC TCACCACCAT GGGGCTTTCC ACAAAAAATG CCATTCTGAT CATCCAATTC ATCAAGGAGC AGATGCATCA GGGGTTGGGG CTGACCGAGG CCACCCGCGC CGCCGTCAAG ACCCGCCTCC GCCCGGTCAT CATGACCTCG CTGGCATTCT TTTTCGGCAC ACTGCCGCTG GCCCTCACCA AGGGGGCCGG AGCAGGGGCG CAGAACGCCA TCGGCACCGC CGTAACCGGA GGGATGCTCT CGGCCACTTT CATCGACCTG ATCTTCATAC CGTTCTTCTT TGTCCTCGTA TCCCGACTGT TCGGCAGAAA AAACCCGTCA GCCAACGAAA AGAGCGAACG TATCACCGCA CCGGAGGTCA ACTGA
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Protein sequence | MAQFFIDRPI FAWVIAIIIM LAGILAIKQL PVAQYPAIAP PQVSINATYP GASAKTIEDT VTQVIEQKMN GIDNLTYMSS TSDSSGSVTI TLTFNAGTDP NIAQVQVQNK LQLATPLLPQ AVQQQGIKVT KSTKNFLMVV GFVSEDGSMT RFDLSDYAAA NVLDIVSRLP GVGETQMFGS QYAMRIWLDP HKLHNYNLTP NDVKSAIKAQ NVQVSAGQLG GNPSPQGQQL NATITAQTLL KTPEEFGAII LRTNSDGSSV HLRDVARSEL GSEDYSSMAR FNGKPAAGMA IKLATDANAL DTAKVVKDKL AELSKFFPSG MKVVYAYDTT PFVKISIEEV VKTLGEAVVL VFLIMFLFMQ NIRATLIPTI AVPVVLLGTF GVLSACGFSI NTLTMFATVL AIGLLVDDAI VVVENVERIM TEEGLSPKEA TRKSMRQITG ALVGIALVLS AVFVPMAFFS GSTGVIYRQF SITIVSAMVL SVLVAMTLTP ALCATLLKPV EKGHVAADSG WFSGFFRWFN AWFDRGREKY EEMVGRSFGK PVRYLVVYGA IVTAMVLFFL RMPTAFLPDE DQGMLFSMVQ LPVGATQERT LEVLKDVENH FLVDQKEAVE SLFTVAGFSF AGNGQNMGLA FVKLKDWELR QRPDLRVKAV AGKAMAAFSG FRDAQAYAFA PPAVMELGTS NGFDFQLQDR GGLGHEKLME ARNQLLGMAA QNPNLMAVRP NGQDDTPQFR LDIDQARAEA YGLSISDIND TISTAWGSSY VNDFVDRGRT KKVYIQGDAP YRMLPEDVNR WHVRNAAGTM VPFSAFASGH WSYASPRLER YNGLPSMEIL GQPAPGKSTG VAMAEMEKMA EKLPAGIGFE WTGLSYQERQ AGAQAPALYA ISLIVVFLCV AALYESWTIP FVNILMLPLG IVGAVMATTA RGLSNDIYLQ IGLLTTMGLS TKNAILIIQF IKEQMHQGLG LTEATRAAVK TRLRPVIMTS LAFFFGTLPL ALTKGAGAGA QNAIGTAVTG GMLSATFIDL IFIPFFFVLV SRLFGRKNPS ANEKSERITA PEVN
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