| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppro_0325 |
|---|
| Symbol | |
|---|
| ID | 4573126 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelobacter propionicus DSM 2379 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008609 |
|---|
| Strand | + |
|---|
| Start bp | 324365 |
|---|
| End bp | 325300 |
|---|
| Gene Length | 936 bp |
|---|
| Protein Length | 311 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 639754363 |
|---|
| Product | thiamine pyrophosphate binding domain-containing protein |
|---|
| Protein accession | YP_900017 |
|---|
| Protein GI | 118578767 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1013] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 42 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTGACAC CACTCAACCT GAGGGAACTG TCCCGGAAAG AGGAACTGTT CGCCCCCGGT
CACCGCATGT GCACCGGCTG CGGCGCGCCC ATCGTGGTCA GGATGGTCAT GATGGCTGCC
CAGTACCCGC TGGTGGTGGC CAACGCCACC GGCTGCCTGG AGGTCTCCAC CAGCATCGAC
GGCTTCACCT CCTGGAAAAC TCCCTGGATA CACAGCGCCT TTGAAAACGC GGCCGCCACT
CTGGCAGGGG TGGAGACCAT GTACCGGTCG CTCAGGAAAC AGGGCAAGCT GGCCGACGAC
ATACGGTTCG TGGCCTTCGG CGGGGACGGG GGAACCGCCG ACATCGGCTT CCAGAGCCTG
TCCGGTGCCA TGGAGCGCGG CCACGACCTG ACCTACATCT GCTACGACAA TGGCGCCTAC
ATGAACACCG GCATTCAGCG CTCCTCGGCC ACCCCCTTCG GCGCCGACAC CGCCACCAGC
CCGGTGGGAA GTGTGAGCAC GGGCAAGCCG CAGCAGGCTA AGGATATGAC CAGGATCATG
GCTGCCCACG GCATCCCTTA CGTGGCCCAG GCATCGCCTA GCCATTGGCA GGACCTGATG
AAGAAGGTCC GCAAGGCCCT GGAGATCAGG GGTCCCAAGT TCATCAACGT CATCGCCCCC
TGCAACCGCG GCTGGCGGAC CGGCACCGAC GATGCCATCC AGCTCTCCCG CCTGGCGGTG
GAAACCTGCT ACTGGCCGCT GTACGAGGTG GAGAACGGGG TCACCCGCAT CACGGTCACT
TCCCGGGAGA AGAAGCCGCT GACCGAGTTC CTGAAACCAC AGGGACGTTT CAAGCACCTG
TTCAAACCGG GCAACGAACA GCTCCTGGCG GAAGCCCAGA GCCAGGTTGA TGCCTGCTGG
CAGCGGCTGC AGCGGGAACA GGCCATGGGC CTGTAA
|
|---|
| Protein sequence | MLTPLNLREL SRKEELFAPG HRMCTGCGAP IVVRMVMMAA QYPLVVANAT GCLEVSTSID
GFTSWKTPWI HSAFENAAAT LAGVETMYRS LRKQGKLADD IRFVAFGGDG GTADIGFQSL
SGAMERGHDL TYICYDNGAY MNTGIQRSSA TPFGADTATS PVGSVSTGKP QQAKDMTRIM
AAHGIPYVAQ ASPSHWQDLM KKVRKALEIR GPKFINVIAP CNRGWRTGTD DAIQLSRLAV
ETCYWPLYEV ENGVTRITVT SREKKPLTEF LKPQGRFKHL FKPGNEQLLA EAQSQVDACW
QRLQREQAMG L
|
|---|
| |