Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppro_0195 |
Symbol | |
ID | 4573376 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelobacter propionicus DSM 2379 |
Kingdom | Bacteria |
Replicon accession | NC_008609 |
Strand | + |
Start bp | 195013 |
End bp | 196386 |
Gene Length | 1374 bp |
Protein Length | 457 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 639754234 |
Product | TraG family protein |
Protein accession | YP_899889 |
Protein GI | 118578639 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3505] Type IV secretory pathway, VirD4 components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTCAAGT CCTCATCGCC CCATAAAACC ACCAACCCGG AATTCATGAC CTCCATCGGC ACCGGAGTCC AGATGGAGAG ACCGACACGG ATAGTTCCGA TTTCGATCCC TGATGAATAC CGAAAACGGC ACATGTTCGT ATTTGGCACT ACAGGGGTCG GCAAAACGCG ACTCTGCGAG AACCTTATTG AGCAGGACAT CATGAAAGGC AACAGCGTGG TCTACTTCGA CCCCAAAGGT GACCAGCAGA TCTTCACCAA GATTTTCGAG GTCGCCCGTA AGGCAGAGAG ACTCAAGGAT TTGATGCTGG TAACGCCGAT TTTCCCTGAA TACTCAGCAG TCATCGATCC TATGGCCTAT TACTTCATGC CGGACGAACT CGTCGGGCAT ATTGTTTCAG GCATCCAGGG CGGACGTGAG CCATTCTACC GCAACATTGC AAAGGAAATC ACTACTGCCA TCATCTCGGC CAACATCATC ATCGCCGATT GGGAAAAACG TCTTCCCAGG CAAAACATGG ATGCTATCAG ACAAAGCATA CGCCGCTCAT CATTGAGCAG CACAATGGGG CTACTGCAGG AAATCAAGAG ACCCGAGGCG CTGCTAAACG CCGGCATGAT CCAGGATATC CTTGAATCTC CCCAAGAGTA TTACTCGAAG GTGTCTTCAA CATTACGCAC CTGCTTGATG GAGCTTTCCT CCGGCAACAT CGGCAAGATT ATCGGCCAGG CCGACAGCAA CCGTTTCATC AGCCGACTTG AACGAAAGAA AGGGGTAATC ATGGTCGTGC ACACCGGTAC CATGATTACC AGGGAGGCAG CCACAACACT TGGCAAAGTC CTCCTGTCGA TGATCCAGTC CTTCATCGGC AGGGTCTATC TCTCTGACAA GCAGAAAGTA TTCCCGCCGC TGTCCATCTA CATAGACGAG GCCCAGAGCC TGTTCTACCA GGGCATTGAG GACCTTTTCG CGAAGGCTGG GTCAGCAGAC GTGATGGTGC ATGCCTTCGC CCAGTCCGTG AACCAAATAT ATGCCGCCAT TGGCGAGGAA TACGGTAAAT CGATCCTCGA CAACACCAAC ACCAAGATCT TCATGCGCTG TTCTGATGCT GAAACATCCG AGTACGTCGT ACGGCATTTC GGCGTGCGCA ACGTGCTGAC CGGAATTTTC GGGTCCAACC AGGTCACTAC CCGTGAAGTG GAACAGGACA TTTTGAAAGT GCAGGATATT CTGGGGCTGC AGCCAAGGGA ATTCTACATG CTGACTTACT CCGGTAGGTA CAAGGGGGTG ACTCGTGATG CCAGAGACCC GCAGTTGAAG ATAGTCTTCC CGTCGGCGCC ATCTTCCGTA ACCATGAGCA GAGGGGCCGC ATGA
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Protein sequence | MFKSSSPHKT TNPEFMTSIG TGVQMERPTR IVPISIPDEY RKRHMFVFGT TGVGKTRLCE NLIEQDIMKG NSVVYFDPKG DQQIFTKIFE VARKAERLKD LMLVTPIFPE YSAVIDPMAY YFMPDELVGH IVSGIQGGRE PFYRNIAKEI TTAIISANII IADWEKRLPR QNMDAIRQSI RRSSLSSTMG LLQEIKRPEA LLNAGMIQDI LESPQEYYSK VSSTLRTCLM ELSSGNIGKI IGQADSNRFI SRLERKKGVI MVVHTGTMIT REAATTLGKV LLSMIQSFIG RVYLSDKQKV FPPLSIYIDE AQSLFYQGIE DLFAKAGSAD VMVHAFAQSV NQIYAAIGEE YGKSILDNTN TKIFMRCSDA ETSEYVVRHF GVRNVLTGIF GSNQVTTREV EQDILKVQDI LGLQPREFYM LTYSGRYKGV TRDARDPQLK IVFPSAPSSV TMSRGAA
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