Gene Ppro_0003 details

Gene Information

• Locus tag: Ppro_0003
• Symbol: recF
• ID: 4573875
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pelobacter propionicus DSM 2379
• Kingdom: Bacteria
• Replicon accession: NC_008609
• Strand: +
• Start bp: 2698
• End bp: 3810
• Gene Length: 1113 bp
• Protein Length: 370 aa
• Translation table: 11
• GC content: 59%
• IMG OID: 639754047
• Product: recombination protein F
• Protein accession: YP_899702
• Protein GI: 118578452
• COG category: [L] Replication, recombination and repair
• COG ID: [COG1195] Recombinational DNA repair ATPase (RecF pathway)
• TIGRFAM ID: [TIGR00611] recF protein

Plasmid Coverage information

• Num covering plasmid clones: 18
• Plasmid unclonability p-value: 0.715959
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGCGCCTCA CCAGACTAAG TATCGCCGAT TTCCGCAACA TCGGATCCGT ACGCTTCACG 
CCAGGCAGAT GCTTCAACCT GATTCATGGC CGCAACGGCC AGGGCAAGAC CAATCTGCTG 
GAGGCCATCT ATCTGCTGGG AAGTCCGCGT TCATTCCGCA ACGCACGTCT GCCGGATTTC 
ATCAGGCATG GAGAGCAGCG GGCGCACCTC CACGGCGAGG TCGAATCTGC CGGCATCCAT 
GGCAGGATCG GCCTGAGCAT CGAGAACGCG GGACGCAGGG TGGAACTGGA CGGCAAGGGG 
ATCCAGCGCG CATCCGACCT GTACGGAAGA ATCAACGTCG TTGTCTTCTC TCCCGATGAC 
ACCGCCATGG TCAGGTACGG TCCCGAGACA CGCAGGCGCT ACCTGGATCG GACGATCTAC 
ATGTGCGATA TCGGTTATCT GCACTGCTGG CACGCATTTC AGCGCATCCT CAAGCAGCGT 
AACCAGTTGC TGAAAAACAG CGACAAAAGC GGCCTGGACA CCTGGACCGA ACAGCTGGCC 
GAGACCGGAG CCGAAATCAT CGTCCGTCGC CGGCGCTTCG TAGAGCGATT GAACGGCATG 
CTGCAGCGGC ACTACGGAAA CATATCCGCC GGAGAGGAAA CAGCATCCGT CGCCTATGAG 
CCGGAGGGAA TCAACTCCCA GGAACAGCAA CGCGTGCGTG AAGAGCTTCT GGAACTCTTC 
CAGCGCAGCC AGCAGAGCGA CATCCGCCAA GGCACCACCA CTGCCGGCCC GCATCGCGAT 
GACCTGAAAT TCCGGCTCGA CGGCCGCCCC CTGAAATCAT TCGGCTCCAC CGGACAGCAG 
AAGAGTTTCG TGCTGGCGCT GAAGATGGCG GAAATAGACA ATCTCACGGA CATCTTCGGG 
GAACCGCCGC TCCTGCTGCT GGATGACGTG AGCTCCGAAC TGGATGACGC GAGAAGCGGC 
AACCTGCTGC ATTTCCTCCT GAACATGGAC ATCCAGGTAT TCATGACAAC CACGCAACGG 
TCCCCGGTTC TGCTGGGCGC CGCGGCACAC TGCGCCGTAT TCCACGTGGA GCACGGCAAT 
CTGACGTTTG AGGGAAATGA AAAGCATGAG TGA 

 

Protein sequence

MRLTRLSIAD FRNIGSVRFT PGRCFNLIHG RNGQGKTNLL EAIYLLGSPR SFRNARLPDF 
IRHGEQRAHL HGEVESAGIH GRIGLSIENA GRRVELDGKG IQRASDLYGR INVVVFSPDD 
TAMVRYGPET RRRYLDRTIY MCDIGYLHCW HAFQRILKQR NQLLKNSDKS GLDTWTEQLA 
ETGAEIIVRR RRFVERLNGM LQRHYGNISA GEETASVAYE PEGINSQEQQ RVREELLELF 
QRSQQSDIRQ GTTTAGPHRD DLKFRLDGRP LKSFGSTGQQ KSFVLALKMA EIDNLTDIFG 
EPPLLLLDDV SSELDDARSG NLLHFLLNMD IQVFMTTTQR SPVLLGAAAH CAVFHVEHGN 
LTFEGNEKHE