| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppro_3841 |
|---|
| Symbol | |
|---|
| ID | 4571463 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelobacter propionicus DSM 2379 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008608 |
|---|
| Strand | + |
|---|
| Start bp | 13629 |
|---|
| End bp | 14495 |
|---|
| Gene Length | 867 bp |
|---|
| Protein Length | 288 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 639754027 |
|---|
| Product | plasmid encoded RepA protein |
|---|
| Protein accession | YP_899682 |
|---|
| Protein GI | 118577443 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 153 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTCAGCA GAGCTACAGA ACAGTTCTTG GCTCAGGTTC TTGCTATCGA GGCCGATAGC
GTCACGCCAG CCGATCTTGG GTTTATGGCG CGATCCTTGA CCCTCTGTAC TATGCCACAC
TCCAAGCCGA GCGATAACGA GTTCACCCGT AGAAATGGCA GCTACACATT AACGATGCAA
GCACCCAAAG CAATAGGCCT GCCGTATGGA TCATTGCCCC GTCTGTTGCT TGCCTGGATC
GTCACAGAGG CCGTGCAGAC GAAGAGCCGC ACCCTAACTC TAGGACACTC CTTATCAGAC
TTCTTGAAGG AGCTGGGATT GTCTAGGCAG GGGGGGGAGC GTGGAGACAT AACCCGACTT
CGGCAACAGA TGCGTCGGTT GTTTTCCTGC TCCATTCGCT GTGAGTACCA GGACGGGAAG
CATGATGCAG GCATTGGTTT CATGGTGGCC GACTCGTATA GCTTGTGGTG GCACCCCCAG
GAGGAGAAAC AGGCCGGGCT TTGGGAATCG ACCTTGACGC TTAGTGAGAA GTTTTATCAG
GAGATCACTG CTGCACCAAT TCCGCTGGAT ATGAGAGCAC TGAAGGCCCT GAAACGTTCA
CCAATGAGCC TGGACCTGTA TATGTGGCTA ACATTCCGCA ACAGCTATTT GAAGACACCA
ACGGTAATCA GCTGGCAGCA GCTACAGCAA CAATTCGGAG CAGAGTACAA CCGAACCAGA
GCATTTAGGG AAGCGTTCCG GGATGCGATG CGGAAAGTGC TGGTGGTCTA TCCTACCGCT
CAGGTAACAG ACGTTGACAA TGGTTTAATG CTCAACCCTA GCCCGACACA TGTTCCACGG
AAAGTCAAAA CCCTGTTGAC GGAGTAG
|
|---|
| Protein sequence | MLSRATEQFL AQVLAIEADS VTPADLGFMA RSLTLCTMPH SKPSDNEFTR RNGSYTLTMQ
APKAIGLPYG SLPRLLLAWI VTEAVQTKSR TLTLGHSLSD FLKELGLSRQ GGERGDITRL
RQQMRRLFSC SIRCEYQDGK HDAGIGFMVA DSYSLWWHPQ EEKQAGLWES TLTLSEKFYQ
EITAAPIPLD MRALKALKRS PMSLDLYMWL TFRNSYLKTP TVISWQQLQQ QFGAEYNRTR
AFREAFRDAM RKVLVVYPTA QVTDVDNGLM LNPSPTHVPR KVKTLLTE
|
|---|
| |