Gene Ppro_3804 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpro_3804 
Symbol 
ID4571439 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter propionicus DSM 2379 
KingdomBacteria 
Replicon accessionNC_008607 
Strand
Start bp180873 
End bp182933 
Gene Length2061 bp 
Protein Length686 aa 
Translation table11 
GC content48% 
IMG OID639753990 
ProductATPase 
Protein accessionYP_899645 
Protein GI118577405 
COG category[L] Replication, recombination and repair 
COG ID[COG0507] ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member 
TIGRFAM ID[TIGR01448] helicase, putative, RecD/TraA family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.101814 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTCTTTT TTCTGACTCG GGTAGTTAAA GTTGGTGAAA AGCCAGCGCA GTCCATGATT 
GACATGTTTT CGGATGCTGA GTTGACATCA ATTATGGAAA CGCCTGCCAG ACATAACGAA
CTCCTGAATG TGAAGGGTAT TGGTGGATCT CGCCTGGGCA AAATCATCGG TTCATGGCAG
AAATACCGTC ACATCAAGAT GCTATCCGAT TTTCTTTCGC CTTATGGACT CTCCCCTGGC
CTTATCACTC GTGTGTATAA CCACTTTGAA GACCGTGCCA TAGTGATTAT CAAGGGGAAT
CCGTACTCAC TTACCCATGT GAACGGAATC GGTTTTAAAA AAGCAGATGA TGTTGCGTTA
CGACTCGGCA CCGATCCGCA TGACCCTTTT CGCCTGGCAG CCTGTCTGCA ATTCGTGATG
GCATCAATGG CCGATGACAG TGGGAACACT CTGGTCAAAC CCGAAGACGT TATTAGTCAG
GCCGCAAAGG AACTGGATAG CGAAAACGGC AGCAACATTG AGAGAATAGA ACTTGCCGGC
GAACTCGAAC AGATGGAGGG GAGAGAAGAG ATCGTTCGCT TGGGTGACAT GCTTGCTCTG
AAACGGCACC ATGCCACGGA AAAGCGAATA TGCGAGGCTC TACGGCGCAG GGTTGAGTTG
CCACCAGTAC CCATCAAATC CCCTTCCGAA ACCCAGCGGT TCATAGAATC AATAGAACAA
AAAATAGGCA TCACCTTTTC CGAAGAGCAG GTTGATTCGA TCAAAATGGT TGCGGCCGGT
CATCGCACTA TTGCTGTCAC TGGGTACGCC GGAACCGGCA AGAGCACAGT ATCAAAAGCC
TTGATTCAAC TACTACTGTC CAAGTTCGAC GAAGATCAGG TCTGCTGCAT GGCGCTTTCC
GGTATTGCCT CAGACAGAAT CAGAACCCTC TCCGGATTCA ACTCTTTCAC GATACATTCG
GCATTAGGTT GGAGGGGACA AGAGTTTGAA CATGGCCCGG ATAACCAGCT TGGTTACCAG
GTAATCGTCT TGGATGAAGG CAGTATGGTG AACTCGTTTA TCATGAGGAA TTTGATTGAG
GCGGTTGACC GGGATGCTGT CCTGATTCTG ATGGGAGATC CTGGGCAGCT TCCCCCCATT
GGCGCCGGCG ATCCGTTTCG CAACATCATC GAGAGCGGCA TTATTCCTGT GGCTCGATTG
ACCCGAATTT ACCGTCAATC AGATGATTCC GTGCTTTCGT TTTTCGCTAA CGATATCCGC
AGAGGAGTGG TGCCAACAGG TTATCTCCAG GAAGAAGGAT TCAAGGATTT TCAGTTTGTC
CAAAAGAATC TACCAGGGAA TTACTTCCGG TTATCCGACA AGGACAAGGT TCCGTTGCGC
GAAGAAAATA GCCAGCGGAT CATTGAATTC ATTGAAGCAA AAATGCGTGC GATTTCGCCT
TACATTAAAA ACCCAATCCT TGATTTTCAG CTTCTGTCGC CGATAAGGAA AGGTCCGCTA
GGGACAGAGG CGCTTAATGA TGTTGCCCAG CGCGTGTTCA ATCCAGGAGA GCATGAGGGG
AGAGCCGTGC AAGTCGGCAG TGTAACATTC AAACCTGGCG ACAAGGTTGT CCATACACTG
AACCGTGATA TGCAAATAGT AAAGGCTCAC AGCTTGAGCG ACTATCACAA CAACATCGAT
TCATCGGAAA CCAAAAGAGT TTTCAACGGA TCAGTTGGTG TTATTCTTGA CGGAGATTCC
GATAATCGCG AGCTGCTCGT TGCATACCCC GAAGGATTTA TTGCAAAATA TGACTCGTTG
CTGTTGAGCG CAGGGGTTTT AGAAATGGCC TATGCTCTTA CCACTCACAA GTGTCAAGGC
AGCGAATACC GCTTTGTCCT GATCCCAATC TCGTCAGCAC ACACGATCAT GCTTACCGCA
CAGTGGCTCT ACACTGCTGT CACGCGAGCA AAACAGAAGG TGCTGATGGT GGGTCAAAAA
TATATGTTCG AAAGGGCTTG CAAGAGCCTA ACCGAGACAA GGAGAACAAC GGTTTTGGAA
AAACTGATTT CCTTAGCATA A
 
Protein sequence
MFFFLTRVVK VGEKPAQSMI DMFSDAELTS IMETPARHNE LLNVKGIGGS RLGKIIGSWQ 
KYRHIKMLSD FLSPYGLSPG LITRVYNHFE DRAIVIIKGN PYSLTHVNGI GFKKADDVAL
RLGTDPHDPF RLAACLQFVM ASMADDSGNT LVKPEDVISQ AAKELDSENG SNIERIELAG
ELEQMEGREE IVRLGDMLAL KRHHATEKRI CEALRRRVEL PPVPIKSPSE TQRFIESIEQ
KIGITFSEEQ VDSIKMVAAG HRTIAVTGYA GTGKSTVSKA LIQLLLSKFD EDQVCCMALS
GIASDRIRTL SGFNSFTIHS ALGWRGQEFE HGPDNQLGYQ VIVLDEGSMV NSFIMRNLIE
AVDRDAVLIL MGDPGQLPPI GAGDPFRNII ESGIIPVARL TRIYRQSDDS VLSFFANDIR
RGVVPTGYLQ EEGFKDFQFV QKNLPGNYFR LSDKDKVPLR EENSQRIIEF IEAKMRAISP
YIKNPILDFQ LLSPIRKGPL GTEALNDVAQ RVFNPGEHEG RAVQVGSVTF KPGDKVVHTL
NRDMQIVKAH SLSDYHNNID SSETKRVFNG SVGVILDGDS DNRELLVAYP EGFIAKYDSL
LLSAGVLEMA YALTTHKCQG SEYRFVLIPI SSAHTIMLTA QWLYTAVTRA KQKVLMVGQK
YMFERACKSL TETRRTTVLE KLISLA