Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppro_3804 |
Symbol | |
ID | 4571439 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelobacter propionicus DSM 2379 |
Kingdom | Bacteria |
Replicon accession | NC_008607 |
Strand | + |
Start bp | 180873 |
End bp | 182933 |
Gene Length | 2061 bp |
Protein Length | 686 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 639753990 |
Product | ATPase |
Protein accession | YP_899645 |
Protein GI | 118577405 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0507] ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member |
TIGRFAM ID | [TIGR01448] helicase, putative, RecD/TraA family |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.101814 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTCTTTT TTCTGACTCG GGTAGTTAAA GTTGGTGAAA AGCCAGCGCA GTCCATGATT GACATGTTTT CGGATGCTGA GTTGACATCA ATTATGGAAA CGCCTGCCAG ACATAACGAA CTCCTGAATG TGAAGGGTAT TGGTGGATCT CGCCTGGGCA AAATCATCGG TTCATGGCAG AAATACCGTC ACATCAAGAT GCTATCCGAT TTTCTTTCGC CTTATGGACT CTCCCCTGGC CTTATCACTC GTGTGTATAA CCACTTTGAA GACCGTGCCA TAGTGATTAT CAAGGGGAAT CCGTACTCAC TTACCCATGT GAACGGAATC GGTTTTAAAA AAGCAGATGA TGTTGCGTTA CGACTCGGCA CCGATCCGCA TGACCCTTTT CGCCTGGCAG CCTGTCTGCA ATTCGTGATG GCATCAATGG CCGATGACAG TGGGAACACT CTGGTCAAAC CCGAAGACGT TATTAGTCAG GCCGCAAAGG AACTGGATAG CGAAAACGGC AGCAACATTG AGAGAATAGA ACTTGCCGGC GAACTCGAAC AGATGGAGGG GAGAGAAGAG ATCGTTCGCT TGGGTGACAT GCTTGCTCTG AAACGGCACC ATGCCACGGA AAAGCGAATA TGCGAGGCTC TACGGCGCAG GGTTGAGTTG CCACCAGTAC CCATCAAATC CCCTTCCGAA ACCCAGCGGT TCATAGAATC AATAGAACAA AAAATAGGCA TCACCTTTTC CGAAGAGCAG GTTGATTCGA TCAAAATGGT TGCGGCCGGT CATCGCACTA TTGCTGTCAC TGGGTACGCC GGAACCGGCA AGAGCACAGT ATCAAAAGCC TTGATTCAAC TACTACTGTC CAAGTTCGAC GAAGATCAGG TCTGCTGCAT GGCGCTTTCC GGTATTGCCT CAGACAGAAT CAGAACCCTC TCCGGATTCA ACTCTTTCAC GATACATTCG GCATTAGGTT GGAGGGGACA AGAGTTTGAA CATGGCCCGG ATAACCAGCT TGGTTACCAG GTAATCGTCT TGGATGAAGG CAGTATGGTG AACTCGTTTA TCATGAGGAA TTTGATTGAG GCGGTTGACC GGGATGCTGT CCTGATTCTG ATGGGAGATC CTGGGCAGCT TCCCCCCATT GGCGCCGGCG ATCCGTTTCG CAACATCATC GAGAGCGGCA TTATTCCTGT GGCTCGATTG ACCCGAATTT ACCGTCAATC AGATGATTCC GTGCTTTCGT TTTTCGCTAA CGATATCCGC AGAGGAGTGG TGCCAACAGG TTATCTCCAG GAAGAAGGAT TCAAGGATTT TCAGTTTGTC CAAAAGAATC TACCAGGGAA TTACTTCCGG TTATCCGACA AGGACAAGGT TCCGTTGCGC GAAGAAAATA GCCAGCGGAT CATTGAATTC ATTGAAGCAA AAATGCGTGC GATTTCGCCT TACATTAAAA ACCCAATCCT TGATTTTCAG CTTCTGTCGC CGATAAGGAA AGGTCCGCTA GGGACAGAGG CGCTTAATGA TGTTGCCCAG CGCGTGTTCA ATCCAGGAGA GCATGAGGGG AGAGCCGTGC AAGTCGGCAG TGTAACATTC AAACCTGGCG ACAAGGTTGT CCATACACTG AACCGTGATA TGCAAATAGT AAAGGCTCAC AGCTTGAGCG ACTATCACAA CAACATCGAT TCATCGGAAA CCAAAAGAGT TTTCAACGGA TCAGTTGGTG TTATTCTTGA CGGAGATTCC GATAATCGCG AGCTGCTCGT TGCATACCCC GAAGGATTTA TTGCAAAATA TGACTCGTTG CTGTTGAGCG CAGGGGTTTT AGAAATGGCC TATGCTCTTA CCACTCACAA GTGTCAAGGC AGCGAATACC GCTTTGTCCT GATCCCAATC TCGTCAGCAC ACACGATCAT GCTTACCGCA CAGTGGCTCT ACACTGCTGT CACGCGAGCA AAACAGAAGG TGCTGATGGT GGGTCAAAAA TATATGTTCG AAAGGGCTTG CAAGAGCCTA ACCGAGACAA GGAGAACAAC GGTTTTGGAA AAACTGATTT CCTTAGCATA A
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Protein sequence | MFFFLTRVVK VGEKPAQSMI DMFSDAELTS IMETPARHNE LLNVKGIGGS RLGKIIGSWQ KYRHIKMLSD FLSPYGLSPG LITRVYNHFE DRAIVIIKGN PYSLTHVNGI GFKKADDVAL RLGTDPHDPF RLAACLQFVM ASMADDSGNT LVKPEDVISQ AAKELDSENG SNIERIELAG ELEQMEGREE IVRLGDMLAL KRHHATEKRI CEALRRRVEL PPVPIKSPSE TQRFIESIEQ KIGITFSEEQ VDSIKMVAAG HRTIAVTGYA GTGKSTVSKA LIQLLLSKFD EDQVCCMALS GIASDRIRTL SGFNSFTIHS ALGWRGQEFE HGPDNQLGYQ VIVLDEGSMV NSFIMRNLIE AVDRDAVLIL MGDPGQLPPI GAGDPFRNII ESGIIPVARL TRIYRQSDDS VLSFFANDIR RGVVPTGYLQ EEGFKDFQFV QKNLPGNYFR LSDKDKVPLR EENSQRIIEF IEAKMRAISP YIKNPILDFQ LLSPIRKGPL GTEALNDVAQ RVFNPGEHEG RAVQVGSVTF KPGDKVVHTL NRDMQIVKAH SLSDYHNNID SSETKRVFNG SVGVILDGDS DNRELLVAYP EGFIAKYDSL LLSAGVLEMA YALTTHKCQG SEYRFVLIPI SSAHTIMLTA QWLYTAVTRA KQKVLMVGQK YMFERACKSL TETRRTTVLE KLISLA
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