Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppro_3803 |
Symbol | |
ID | 4571438 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelobacter propionicus DSM 2379 |
Kingdom | Bacteria |
Replicon accession | NC_008607 |
Strand | - |
Start bp | 179409 |
End bp | 180182 |
Gene Length | 774 bp |
Protein Length | 257 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 639753989 |
Product | hypothetical protein |
Protein accession | YP_899644 |
Protein GI | 118577404 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.000946113 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGTCGGACG TAGTAGAGTT TGTTGAATAC ACAAAATCAA TAACGAGGAA CATTGTGATA CGAGAGAGAA TCAAGGACTA CGAAAAAGAT CTCAAGGCAG CAAAGATGGA GCTTGAAGAC CACAATTACG AAGTCGATAC TTCAGAAGTG CCGTGGTATA TCGAAGCTCA AGGTGGAGAA AGGCGGACTC TAAAAGAGTG TGCAGATCTA CAAACCGAAG AGTGGCGCAA TATAGAAATA AAACTTCTCG ACGCAATTCA TTTGGCAGAA ACGAAACTAA GCTCAGTTCG ATCAGATTTG GCGAGAAGTG AGGAGTTCCG GGAATGGCGG ATAATTGTCG ATGGATTTGA GTCTGGGACA ACATTGGCAC CAAGTTCAAG TGAAGCACTG AAAGTTGCGA TCACTAAAAT CGACCGGTCT GATTACCCAT ATGTTGAAAC GACCATGTGG ATTAGCGTCA AGGTTACCTG CGATGAAAGT GGGGAAGAAG ATCTCGATAC TGTGGCGCTT CATCCGGATG AACCTGGTTG TGTTGATGGT AAAAACCATG ATTGGCAATC TCCTCACAAG GTCGTTGGAG GGCGTGAAGA TTATCCTGGT ATGTGGCCAA ATGAAGCGGG TGTGATAATC CGAGAAGTGT GTGGGAATTG CGGGAAGTAC AAGGTCACGA ATACCTGGGC CCTGGACGTG GCGACTGGTG CACACGGTCT TCGATCCGTA TCCTACGAAA AGCCAGATGA TTTTTCGCTT CAATGGCTTG CAGACAAAAG ATAA
|
Protein sequence | MSDVVEFVEY TKSITRNIVI RERIKDYEKD LKAAKMELED HNYEVDTSEV PWYIEAQGGE RRTLKECADL QTEEWRNIEI KLLDAIHLAE TKLSSVRSDL ARSEEFREWR IIVDGFESGT TLAPSSSEAL KVAITKIDRS DYPYVETTMW ISVKVTCDES GEEDLDTVAL HPDEPGCVDG KNHDWQSPHK VVGGREDYPG MWPNEAGVII REVCGNCGKY KVTNTWALDV ATGAHGLRSV SYEKPDDFSL QWLADKR
|
| |