| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppro_3788 |
|---|
| Symbol | |
|---|
| ID | 4571264 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelobacter propionicus DSM 2379 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008607 |
|---|
| Strand | - |
|---|
| Start bp | 162417 |
|---|
| End bp | 163739 |
|---|
| Gene Length | 1323 bp |
|---|
| Protein Length | 440 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 639753975 |
|---|
| Product | initiator RepB protein |
|---|
| Protein accession | YP_899630 |
|---|
| Protein GI | 118577390 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG5527] Protein involved in initiation of plasmid replication |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.593501 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGATATATG TCTGCTTCAA ATGGAGGTAT TTTATGGCAG ACGACAAACC AACCCCTCGG
GCAAAAAATG ATGTTCAGGA ATACCTTCCT GGGATGGAGA TGGCCCCAGA AGACTATATC
CTTAAAAAAC ATAATGCGAT CATTCATCGT ACGCATGCCT CCACGCCGAC CGAAGAGAAG
GTTTTCAGTG CTCTACTCAT GGTTGCAAGA GCACAGATGA AATCCGGTAT CGTACCGCCA
GACGGCAAAT TTCAAACCAG CATAAAATTT CTACGGAACT TCACCAGGAC GAGAGCTACA
CATAACCATC TCCTTAAAAA TGCTCTCACG AGTTTACAGG AAAGACCCTG GCAATATGAT
ATGTTCCATG AAGACAAATT CCAGGAGTGG CGCAGTTTTG TACCGATATC TGAAGCGCGA
ATTAATCGAT TTGGATGCGT AACATTCTTT TTTGCACCGA CGATCAATGA GGCTCTTAAT
AATCCCAGTA TTTACACTCA GATAGACTTG AAAATCATTC GTGGTTTAAA GTCTCTGTAT
TCGATAGCTC TTTATGAACT TGGTGTGACT CACATTGATG AACATCGAGA ATTTTCCCTT
GAAGAATTCC GAGACTACAT GGGGCTTAAA GTTGGAGAAT ATAGTGCTCC CACGGATCTT
CGTCGTCACG TTGTTGAACC GGCAGTAAAT GAAGTCAATG AGAAAACGGA TGTAAGGGTT
GAGGTAAGGC TACTCAAACG TGGGAATCGT GGAGCTTTAA CAGGCTTCGA TTTCACGTTT
TCTCGAATAG AAGAGGTAGA GGTTGTTCCG GAAGCATATC AACTTGAGCA GATTGCCGAG
TTGTGCGCTA TGCTCCCTGA AGGGATTGGT TCCCTCCGCG GTGTGGTTCC ATTGTTGAAA
AAGATGTTAG ACCTGCGTGG TGAAGAAAAT GTAATTTCGA ATATTCAATA TTTTGTTGAA
CGATTTAACG ATAAAAAACA AGCCCCTATC CCCTCCCCTG GCGGGTATCT TCGTACAGTA
CTTGAGAATG ACTATGGCCT CGAAATCCGT GAGCGCAAAG AAATAGAGAG ACTGTTGCAA
GAGAAGAGGC TTTTGAAAGA ATCTTTGAAA GACGACATTA CCAATGCATA TATAGCTAGA
AACGAAGCTG AGGATTCAAA GATCTTGCAG ATGCAAGATA AATATTATGA ATACTATTTG
GGTTTGCCTG CATTAAGACA GGCTGAAATT ATTGAGCGGA TAGAGAAATC TGAATTATAT
ATCGGTCCAA TGAAGACGCA GATTATGGGG TACTTGCAAC TTGCAGAAAA GGTTTTTTTG
TGA
|
|---|
| Protein sequence | MIYVCFKWRY FMADDKPTPR AKNDVQEYLP GMEMAPEDYI LKKHNAIIHR THASTPTEEK
VFSALLMVAR AQMKSGIVPP DGKFQTSIKF LRNFTRTRAT HNHLLKNALT SLQERPWQYD
MFHEDKFQEW RSFVPISEAR INRFGCVTFF FAPTINEALN NPSIYTQIDL KIIRGLKSLY
SIALYELGVT HIDEHREFSL EEFRDYMGLK VGEYSAPTDL RRHVVEPAVN EVNEKTDVRV
EVRLLKRGNR GALTGFDFTF SRIEEVEVVP EAYQLEQIAE LCAMLPEGIG SLRGVVPLLK
KMLDLRGEEN VISNIQYFVE RFNDKKQAPI PSPGGYLRTV LENDYGLEIR ERKEIERLLQ
EKRLLKESLK DDITNAYIAR NEAEDSKILQ MQDKYYEYYL GLPALRQAEI IERIEKSELY
IGPMKTQIMG YLQLAEKVFL
|
|---|
| |