Gene Ppro_3781 details

Gene Information

• Locus tag: Ppro_3781
• ID: 4571257
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pelobacter propionicus DSM 2379
• Kingdom: Bacteria
• Replicon accession: NC_008607
• Strand: -
• Start bp: 157561
• End bp: 158160
• Gene Length: 600 bp
• Protein Length: 199 aa
• Translation table: 11
• GC content: 37%
• IMG OID: 639753968
• Product: putative sex pilus assembly and synthesis protein
• Protein accession: YP_899623
• Protein GI: 118577383
• TIGRFAM ID: [TIGR02761] type IV conjugative transfer system protein TraE

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.271719
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAGATGA CTAATTACTT GAGTAATGCA TCTAATTTGT ATGGACAAAA CAGACTATTA 
AAATTCGTAG TTGTAGTGTT GGGAATAACT ACGGTTGTCA ACACATACAT GATCAGAAAT 
GCTCAACAGA TGGAAAAAGT TGTAATAATA CCATCTGTTA TAAACGATAA AATGTGGCTG 
AGTGGGACTA AAGCATCAGA TGAATACGTA AAGCAGTTTG CAAGAGATGT TTCAAACATG 
TTTCTGACGT ATCACCCGTC TAATGTAAGA ACAAACTTTA ATGACCTATT GGCGATGTAT 
GATCCATCAG AATTTGCGGA AGCTCAAAGA GTACTATACA ACCTTGCCGA GCGTATCGAA 
GAGTCAAAGG CCGCAAGCGG TTTTTATATA ACAAAACTGG TTAACAACGA GGAGAAGCAC 
CAGCTGGAAA TAACCGGTTC CAAGACAATG ATCATAAATG GAAAAGTCAC AGACAATTCC 
ATAAAAATAT ATCTGCTTGA TTACAAAATC GAGTCTGGCA AGTTCTGTAT TCTAAGGTTT 
ATGGAAAAAA GCGAATACGA CAAATACAAG TACGAGGAAG CCGCCAATGC GAAAAAATAG 

 

Protein sequence

MKMTNYLSNA SNLYGQNRLL KFVVVVLGIT TVVNTYMIRN AQQMEKVVII PSVINDKMWL 
SGTKASDEYV KQFARDVSNM FLTYHPSNVR TNFNDLLAMY DPSEFAEAQR VLYNLAERIE 
ESKAASGFYI TKLVNNEEKH QLEITGSKTM IINGKVTDNS IKIYLLDYKI ESGKFCILRF 
MEKSEYDKYK YEEAANAKK