| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppro_3749 |
|---|
| Symbol | |
|---|
| ID | 4571422 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelobacter propionicus DSM 2379 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008607 |
|---|
| Strand | + |
|---|
| Start bp | 125794 |
|---|
| End bp | 126750 |
|---|
| Gene Length | 957 bp |
|---|
| Protein Length | 318 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 639753938 |
|---|
| Product | phage integrase family protein |
|---|
| Protein accession | YP_899593 |
|---|
| Protein GI | 118577353 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG4974] Site-specific recombinase XerD |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.00852374 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAACTCG ATTCAGGGAA CATTACGGAC GATTTACAGC GGTGGGTCGT TGCATACATG
CAGGAAATAA CAAACAAAAA CCTCTCAGGG CGAACCAGAG ACATTTATGC AGGGATCCTG
GATGATTTCG TGGAACATTC GCGTCAATTT CAGGGAGAAC TTGGAATTGA GGACATAAAT
CGCATCTTTC TCAATGGTTA TTTAGCGGAA AGAGGAAACA CCGGCAGAAG ATTCAGCGCA
ACAACAAAAA AACTCCATAT CACGGTATTA AAGACGTTTT TTCTTTATAT CACCGAGAAC
AATGACAACA ACCATGATTT TGAAAAGATG TTCAAGAAAA TGAACATTAA GTCCGAATCA
AACGAGAAAC CAGCTCTTAA CGAGGACGAT GTTCAGCGTC TTCTCAATTA CCTTGAAAAA
ATCAAGAGAG CGCGCCGAAA CCAGAACACA AACATACGAA ACACCCTACT TTGCAAAATA
ATGCTCTTCG GAGGACTCAG GGCCGTCGAA TTAACGCATT TGCGCCTCAA AGACATGGTT
TACGACAAGG AGGACGATAT CTACTCATTA TTGATAGAAG GGAAGGGGGG TAAACAACGA
ACAGTGTATA TCCCTCGAAC ATTGATCGAG GACGAGGTGG AGACGCTGAA AGAAGAGTAC
GGAGAAGAGT GGCTAATCTG CTCAACCCGT AATGGCACCA TTGTCGACCG CACCAATCTT
TACCAGATCA TCACCGGAAT ATACAAAAGG GCAGGGGTGG ATCATACAGG CCTGCATATC
CTCAGGCACA CCTTCGCTCG GCGCCTGGTC AACAACAACA CGAACCTGGA AACAATTAGA
GACCTACTCG GACACTCAAA TATCGCCATC ACAGCGAAGT TTTACGCGAA AACGAATGAG
AACAACAAGA AAGCCGCGAT ATCGCGCTTA ATGAAAGAAG AAAACGAAGG AGAGTAG
|
|---|
| Protein sequence | MKLDSGNITD DLQRWVVAYM QEITNKNLSG RTRDIYAGIL DDFVEHSRQF QGELGIEDIN
RIFLNGYLAE RGNTGRRFSA TTKKLHITVL KTFFLYITEN NDNNHDFEKM FKKMNIKSES
NEKPALNEDD VQRLLNYLEK IKRARRNQNT NIRNTLLCKI MLFGGLRAVE LTHLRLKDMV
YDKEDDIYSL LIEGKGGKQR TVYIPRTLIE DEVETLKEEY GEEWLICSTR NGTIVDRTNL
YQIITGIYKR AGVDHTGLHI LRHTFARRLV NNNTNLETIR DLLGHSNIAI TAKFYAKTNE
NNKKAAISRL MKEENEGE
|
|---|
| |