| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppro_3728 |
|---|
| Symbol | |
|---|
| ID | 4571335 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelobacter propionicus DSM 2379 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008607 |
|---|
| Strand | + |
|---|
| Start bp | 107475 |
|---|
| End bp | 108890 |
|---|
| Gene Length | 1416 bp |
|---|
| Protein Length | 471 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 639753917 |
|---|
| Product | DNA primase |
|---|
| Protein accession | YP_899572 |
|---|
| Protein GI | 118577332 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0358] DNA primase (bacterial type) |
|---|
| TIGRFAM ID | [TIGR01391] DNA primase, catalytic core |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGAATCC CTGATGATAT CAAAAAGGAA ATCCTCGACA GAGCCGGCCA GAATATTGTC
CAGCTCATAG GCGAAGTCAT TCCTTTAACC AAAGCAGGTA CCACGTATAA GGCCTGCTGC
CCTTTTCACA ACGAAAAAAC TCCTTCCTTC ACAGTCAACC CCTCCCGTGG CACATGGCAT
TGTTTCGGCC AGTGCAATGA TGGAGGCGAT GTTGCAAAGT TCTTCATGCT TCGGGACGGA
ATCAAGTTCC CTGATGCTTT GGCGCTTTTG GCTCGCCGTG TGGGTATAAC CATCCCTCAG
GGCGAAACCA AGGAAGAAAA GGAGCGCAAA GCCATGCTTC ATGCCCTGGC AAAAGCGCAA
TACTTTTTCC AACAAGGACT ATCAGAAAAT CGAAATGGTG GCCGGGCATA TGCAGATTCC
CGTCTCACAC CGTATGAAGT TGAAAGACAT GGAATCGGAT ATGCTCCAAA AGGAGGAAGA
GCCCTGGTCG ATTATCTCGA TAAATCAGGA GTTCCTTTTT GGGCTGCCGA AAAAGCCGGC
CTGATACGAA GAGAGGAAAA CGGACCCTAC AAAGATTGTT TCTGGGGGCG AGTCATGTTC
CCTATCCGTG ATGATCGAGG GCGAGTGATT GCTTTCGCAG GTCGGAGAAC AGATAAAATC
AAAACCCTGA AGTATGTCAA TTCTCCAGAG TCTCCCCTTT ACAAGAAGGA AGCTACGCTC
TACGGAATTG ACACAGCAAT TCAGGCCATC CAGGAAACTG GTGAGGTCTA CGTAGTTGAA
GGTTATTTTG ATGCAATAGC AATGATATCG GCTGGAATCC TGAACACAGT AGCCACTTGC
GGTACTGCGT TCACAAAGGA ACATGCCGCG GTTCTTCGGC GCTACTGCAC ACGAGTTAAT
TTCATGTTTG ACGGAGATGC AGCTGGCAAA AAAGCCTTGC AAAAAGCAAC GCTGCTGGCA
CTCAAGGAGG AGTTTACTGT AACTGCCTAC CTTCTTACCG AGGATCAAGA TCCGGACAGT
TTTTTCAAAT CTGGTGAATC TTTCAACGAA ATCAGGTCGA TGACTGGGCT TGATTATCTG
AAAGAGTCAG GTGCCGAAAT GTCACCCATT CACAAGAAGC TCCATCGACT CGAACGATTG
GAGCGAGGTC TCTTTTACAT GGCGGAAAAG ATCCCGGAAG TTAGAGGGAT GATCGCCAAA
AGTGGAAACC TTGAAGAACT GTTCAGCCCT GATCTGTTGC CGGCAATTCA TGATGTAATT
AACACACCGC CCCCCCCATT TTCGCCCAGG GTACAACGAA TGATTGAAAC GCTTGTGCGC
GTCAAGGCAT CATTGGAACT GGGAAACACC GCAGAGCCAA CTGTTCGGTC TGCAATGTTG
CTGGATGTTG GGGAGGCTCT TTCACTAATT GGATAA
|
|---|
| Protein sequence | MRIPDDIKKE ILDRAGQNIV QLIGEVIPLT KAGTTYKACC PFHNEKTPSF TVNPSRGTWH
CFGQCNDGGD VAKFFMLRDG IKFPDALALL ARRVGITIPQ GETKEEKERK AMLHALAKAQ
YFFQQGLSEN RNGGRAYADS RLTPYEVERH GIGYAPKGGR ALVDYLDKSG VPFWAAEKAG
LIRREENGPY KDCFWGRVMF PIRDDRGRVI AFAGRRTDKI KTLKYVNSPE SPLYKKEATL
YGIDTAIQAI QETGEVYVVE GYFDAIAMIS AGILNTVATC GTAFTKEHAA VLRRYCTRVN
FMFDGDAAGK KALQKATLLA LKEEFTVTAY LLTEDQDPDS FFKSGESFNE IRSMTGLDYL
KESGAEMSPI HKKLHRLERL ERGLFYMAEK IPEVRGMIAK SGNLEELFSP DLLPAIHDVI
NTPPPPFSPR VQRMIETLVR VKASLELGNT AEPTVRSAML LDVGEALSLI G
|
|---|
| |