| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppro_3710 |
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| Symbol | |
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| ID | 4571401 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelobacter propionicus DSM 2379 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008607 |
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| Strand | + |
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| Start bp | 88182 |
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| End bp | 89441 |
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| Gene Length | 1260 bp |
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| Protein Length | 419 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 639753899 |
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| Product | outer membrane efflux protein |
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| Protein accession | YP_899554 |
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| Protein GI | 118577314 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01844] type I secretion outer membrane protein, TolC family |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGTAT ATTTGCTGCT CCTGTTGACG ATTCTGTTTT TACCTCATGC TCTTTACGCC
GCGAACATTC TGACGCTTGA TGACGCTCTG GAAACTGCCC TGAAAAATCA CCCTCAATTG
ATGGAAGCCA GAGAATATCT TCATGGTGCT GAGGCCCGAA CCCTTCAGGC AAAAGCCTCT
TACTATCCAC AGGTCAGTAT TGCAGCTGAC TGGAACAAAG GGCGGACGTT CCTGACGCCA
ACGGAAAGTA TAAAATCTAC AAAAGTGCAT TCTGAGGCGG TTTACCTCAA GCAAACCATC
TATGACTTCG GCCGGACAGC AAATGCGGTT GAAGCGGCAC ACGAGGCTGA CATTGCAGCT
TCGGAAACAG TTGCTGTAAC GCGTCAGGAT CTGGCATTCC GGGTAAGATC CGCATACTAT
CTTTTACTTG CTGCAGAAAA GCAGGTCGTT GCAGTAAAGG AAACCGTTGA AGCCAGGGAA
GCGGTTTTCA GGCAGGCCCA GGAGTTTTTT AGCCAAGGTA TCAGGGCTAA GGTAGAAGTC
ACAAGGGCCG AGGCAAATCT GTACGCGGCC AGGACTGCTT TAATACGGGC AGAGAATAAC
AGGGATATCG CCTGGGTCGA ACTTTCCAAC TCCATCGGGA TCCCCTCTTT AAATAAATGC
ATTCTTGCTG AACCTTCAAC TGCAATCGGG GCTGTGCCGG ATCGTGCCTT TGCCCAGAAC
GAAGCTTTAA ACAACAGGGC TGAGCTGAAA CGCCAAACAG CCTTGAAAAA CTCGGCAGCA
GCCTCATTGA AAGCAGCAAA AAGTGGATAT CTCCCTCTGT TAACCGGTAC AGCCAGTGCT
GGCTATGCAG ACAGGGACTT CCCTCCCGGT GGAAATGTCT GGGCGATAGG ATTGAATCTG
ACCATTCCGA TATTCTCCGG TTTTTCAACT GTTGCGCAGA CAAAAGAGGC CGTGGCCGCA
CTGCGCGGAG TCGAAGCGCA ACACAACAAC CTGAAGTTGC AGATCGCAAA AGACGTTGAA
ACCGCCTGGT TCAGTATCAG AGAGGCTACG GCACGAATTT CATCAACTGA AAAGGAAGTG
ATTGCCGCTC GAGAGAATCG GTCTCTGGCC ATGGGACGTT ATCAGGAAGG GATTGGCAAC
ATAATTGAGG TAACCGATGC ACAATCACAA TCACTTGATG CCGATACATC AAAAATCCAG
GCGATTTATG ATTATCACAT TGCGGTAGCC AGGCTTCACA GGGCAATCGG CAAAGAATAG
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| Protein sequence | MKVYLLLLLT ILFLPHALYA ANILTLDDAL ETALKNHPQL MEAREYLHGA EARTLQAKAS
YYPQVSIAAD WNKGRTFLTP TESIKSTKVH SEAVYLKQTI YDFGRTANAV EAAHEADIAA
SETVAVTRQD LAFRVRSAYY LLLAAEKQVV AVKETVEARE AVFRQAQEFF SQGIRAKVEV
TRAEANLYAA RTALIRAENN RDIAWVELSN SIGIPSLNKC ILAEPSTAIG AVPDRAFAQN
EALNNRAELK RQTALKNSAA ASLKAAKSGY LPLLTGTASA GYADRDFPPG GNVWAIGLNL
TIPIFSGFST VAQTKEAVAA LRGVEAQHNN LKLQIAKDVE TAWFSIREAT ARISSTEKEV
IAARENRSLA MGRYQEGIGN IIEVTDAQSQ SLDADTSKIQ AIYDYHIAVA RLHRAIGKE
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