Gene Ppro_3677 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpro_3677 
Symbol 
ID4571284 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter propionicus DSM 2379 
KingdomBacteria 
Replicon accessionNC_008607 
Strand- 
Start bp57536 
End bp58159 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content39% 
IMG OID639753866 
Producthigh-affinity nickel-transporter 
Protein accessionYP_899521 
Protein GI118577281 
COG category[R] General function prediction only 
COG ID[COG2215] ABC-type uncharacterized transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.841534 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTATTTAG TTGCCGAGGT AATATCAATC ATTTTCATAA GCTTTGTTTA TGGAGCAGTC 
CATGCAATCG GTCCTGGCCA TAATAAGGGC GCTGTTTCGG CATATGTCAT TTCGAACAAA 
TCAAAGCAGC TCAAAAGTGC TGTCCTTGGC TTTTCATCCG GAATAATGCA TGGGGTGGGC 
ACTATCGGAA TTGTTATGCT CATTTATTAT GTTACCGATT ATAGGCTTGG GCATACTTTC 
GATACCGTTT CGAAGCAACT AATGCTTTTC TGCTCTGTCG GAATAATTGT AATAGGTTTA 
GTTAATTTAG TATCTTCCGT TCAAGAACGT AAACAAGGCA AAATTGAAAA CTCAATATTC 
ATCTTTTTAA GTGGACTCGT TCCTTGTCCT GCTATTCTCA TTATTCTGTC TTTCTTTATT 
TCCTCAGGGG TTATTGGTAT TGGAGTAGCA GCGGCTCTGT CCTTAACACT AGGCATGTCG 
TTATCTTTGA GTGTAATTTC ACTGTCTGCT TCCCAGGCAG GACTATTATT AAACAGGGGA 
GATGGCAGGT GGCAAAGATA TTTTAGAAGT GCAGGCGCTC TAGCAGTGAT TCTTTTCGGT 
ATTTTACTGT ATATGAATAT ATAA
 
Protein sequence
MYLVAEVISI IFISFVYGAV HAIGPGHNKG AVSAYVISNK SKQLKSAVLG FSSGIMHGVG 
TIGIVMLIYY VTDYRLGHTF DTVSKQLMLF CSVGIIVIGL VNLVSSVQER KQGKIENSIF 
IFLSGLVPCP AILIILSFFI SSGVIGIGVA AALSLTLGMS LSLSVISLSA SQAGLLLNRG 
DGRWQRYFRS AGALAVILFG ILLYMNI