Gene Ppro_3644 details

Gene Information

• Locus tag: Ppro_3644
• ID: 4571304
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pelobacter propionicus DSM 2379
• Kingdom: Bacteria
• Replicon accession: NC_008607
• Strand: +
• Start bp: 17840
• End bp: 18505
• Gene Length: 666 bp
• Protein Length: 221 aa
• Translation table: 11
• GC content: 57%
• IMG OID: 639753834
• Product: ABC transporter related
• Protein accession: YP_899489
• Protein GI: 118577249
• COG category: [V] Defense mechanisms
• COG ID: [COG1136] ABC-type antimicrobial peptide transport system, ATPase component

Plasmid Coverage information

• Num covering plasmid clones: 21
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCACTCA TCGAAATCAG TAATCTGAAG AAACAGTACA CCAGCGGCGA CGATGTCGTC 
GAAGCGCTGC GCGGTGTGAG TATATGCATT GAGAGCGGAG AATTCATCAC CATCATGGGG 
CAGTCAGGTT CCGGCAAGAG CACCCTGCTG TCCGTTCTTG GCGGGATGAA TCATCCCACT 
ACGGGCGAAG TCGAGATGGC CGGTGTAAAA CTGTATCGGC TTCCCGGTGA AAAGCTGGCC 
GACTTCCGTG CACAGAATCT GGGTTTTGTC TTCCAGTCCT TCCATCTGAT CCCCTATCTG 
ACCGCCATGG AGAACGTCAT GCTGCCGCTG GCCATAGTCA AAATGAGCTC GGCAGCACAA 
GAGAGCGCTG CCCGTCAGGC ACTCGTACGG GTCGGCCTCG GCAACAAACT CGACCGTCTC 
CCCAATCAGC TCTCCGGTGG AGAACAGGAG CGGGTCGCCA TTGCCCGGGC GATTGTCAAC 
AACCCACACA TTCTCCTGGC TGATGAGCCG ACCGGCAACC TGGACTCCAC AACTAGCGAG 
GAGGTCATGG CGCTCTTCCT CGAACTGAAC GACGCGGGCC AAACCGTTGT CATGGTAACG 
CACAATCCGG ATAACGGCCT CTATGCCGAC CGGACCATAA CCCTGAAAGA CGGTATGGTC 
GTTTGA 

 

Protein sequence

MALIEISNLK KQYTSGDDVV EALRGVSICI ESGEFITIMG QSGSGKSTLL SVLGGMNHPT 
TGEVEMAGVK LYRLPGEKLA DFRAQNLGFV FQSFHLIPYL TAMENVMLPL AIVKMSSAAQ 
ESAARQALVR VGLGNKLDRL PNQLSGGEQE RVAIARAIVN NPHILLADEP TGNLDSTTSE 
EVMALFLELN DAGQTVVMVT HNPDNGLYAD RTITLKDGMV V