| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppro_3643 |
|---|
| Symbol | |
|---|
| ID | 4571303 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelobacter propionicus DSM 2379 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008607 |
|---|
| Strand | + |
|---|
| Start bp | 16667 |
|---|
| End bp | 17827 |
|---|
| Gene Length | 1161 bp |
|---|
| Protein Length | 386 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 639753833 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_899488 |
|---|
| Protein GI | 118577248 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAACTGC ATACCATATC GATCAATAAC CTGAAACGCC GCAAGGCCAA GATGGCCTTC
CTGACTATCG GCCTGATGGT CGGCATCGCC ACCATAGTGA CCCTAGTGAC CCTGACTCGC
TCCATGTCCA GCGACATCGA GCGCAAGATG GACGAGTTCG GTGCAAATAT ACTTGTAACT
CCCCAAAGCA ACGGACTGGC CATGAATTAC GGTGGTATCA GCCTGGGGGG CGTGACCTTT
GATCAGCGCG AGATTTTGGA AGAGGATCTG GCAAAAATCA AGACCATCAG GAATAGCAAG
AATGTTTCGG CTATTGCGCC AAAGGTGCTG GGAGGCATCA AGGTTGGGAC GCACAACGTA
CTGCTGGTTG GTGTCAACTT TGACAGTGAG CTGAAGATGA AGCAGTGGTG GAATATCTTT
GGAGACACAC CCAAAGGTGA CAACGAGCTA TTGCTGGGCA GCGATGCGTC CAAGGTACTC
AACGCAAGTT CCGGTGACAA CATTACGATA AAGAACGAGA TCTTCAAGGT GGCCGGAGTG
CTTGACCAGA CCGGATCCCA GGATGATTCT CTGGTTTTTG CATCGCTGAA GAAAGCCCAG
AAGCTGCTCG GCAAAGAAGG GAAGATCACC CTGGCCGAGG TGGCGGCGCT CTGCTCCGGC
TGCCCCATTG GCGACATGGT CACCCAGATC GCCGAGAAAC TCCCCGATGC CAGGGTGTCG
GCCATCCAGC AGGTAGTCGA GGGAAGACTG AAGGCCCTGG ATCAGTTCAA ACGCTTTTCC
TATGCCATGG CCGGCGTGGT GGTCTTCATC GGTTCACTGA TCGTCTTTGT CACCATGATG
GGCAGCGTCA ACGAGCGGAC CACCGAAATC GGGGTCTTTC GGGCAATCGG CTTCAGGAAG
AGCCACATCA TGCGGATCAT ACTCCTGGAA GCGGCTCTGG TCAGCTTGCT GGCCGGGTTT
CTGGGGTATG CCGTCGGCAT GGGAGGAGCC AAGCTGGCCC TGCCGTTCAT GGCGGAGAGC
AAAAATGCCC ATCTGGTCTG GGATTCGACC GTGGCCTTTG GTTCAATCGG CCTGGCGTTG
ACACTTGGTC TTCTGGCCAG TCTCTATCCG GCGCTGCATG CCAGCAAGAT GGACCCGACC
GAAGCTCTGC GGGCACTATA A
|
|---|
| Protein sequence | MKLHTISINN LKRRKAKMAF LTIGLMVGIA TIVTLVTLTR SMSSDIERKM DEFGANILVT
PQSNGLAMNY GGISLGGVTF DQREILEEDL AKIKTIRNSK NVSAIAPKVL GGIKVGTHNV
LLVGVNFDSE LKMKQWWNIF GDTPKGDNEL LLGSDASKVL NASSGDNITI KNEIFKVAGV
LDQTGSQDDS LVFASLKKAQ KLLGKEGKIT LAEVAALCSG CPIGDMVTQI AEKLPDARVS
AIQQVVEGRL KALDQFKRFS YAMAGVVVFI GSLIVFVTMM GSVNERTTEI GVFRAIGFRK
SHIMRIILLE AALVSLLAGF LGYAVGMGGA KLALPFMAES KNAHLVWDST VAFGSIGLAL
TLGLLASLYP ALHASKMDPT EALRAL
|
|---|
| |