| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CFF8240_1791 |
|---|
| Symbol | |
|---|
| ID | 4539546 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter fetus subsp. fetus 82-40 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008599 |
|---|
| Strand | + |
|---|
| Start bp | 1742748 |
|---|
| End bp | 1745948 |
|---|
| Gene Length | 3201 bp |
|---|
| Protein Length | 1066 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 32% |
|---|
| IMG OID | 639747139 |
|---|
| Product | serine protease |
|---|
| Protein accession | YP_892901 |
|---|
| Protein GI | 118475306 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG1404] Subtilisin-like serine proteases |
|---|
| TIGRFAM ID | [TIGR01414] outer membrane autotransporter barrel domain
[TIGR02601] autotransporter-associated beta strand repeat |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.0261515 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAA GCGATAAAAT GGTTATAATC GCATTGTGTA CATTTTTAAA TAGCTATATT
TTTGCACTTG AACCAAATTT TGAAAAAGAT TTAGATATTA TAAATACAAA ATCTGCTTAT
GAGCAAGGCA TAACCGGGCA AGATGTATTT ATAGGCATAT TTGATGATGA TTTTAGGTTA
GAACATAGTA GTTTAAATGA TCAAATACTA GAAGCTCTTA CTTTTAGTGA TCAAACTAAA
GCAAATTATT GGAATTATAA TTCACACGGT TCCCAAGTAG CCGCAATCGC TCTAGGAGCT
TTTAATAATC CCATTATGCA TGGAGTTGCT TATAACGCAA AAGGTTATGG AATGCAAGCT
CCTGCCTCGC TTGATGCATT TAATCACATT AAGGAAAATT TAGATGCGGA GTATAAGTTT
TTCGGAGATC CAAATAAAAA TATTAAAATT ATAAATAACT CATTTGGAGA TTTTGTATTT
CCTATTTTGC ATATCGACGC TACTGAAGAT TTTTATGAAT TAACGCAAGA TGAAGTCGAG
GATTATATAA TCGAAGCTAT GGATCAAACA AATGCAAACT CATCTATAAT CAGACTGTCG
AAAGAAAAGC AAATTTTAAA TATTTTTGCT GCTGGAAACT CAGGCATATC TTCTCCATCC
ACTTTGGCTT CTTTGCCTCA TTACGATCAA GATCTCAATG CTTGGCTAGC TGTCGGAGCT
ATAGATTCGT CTAAAGTAAC GAAGTTGGGC GATGAGGGAT TTGATATGAG CAAACCTTTT
GCATTTACGG ATTTTAGTAA CGCTTTTAAA GGAACGGCTT ATTTTTCTAT ATTAACTCCT
GGTGAATATA TCTGGTCTGC CGATAGCGCC ACTACAAATG GTTTCGTACC AGAACAAGGC
ACATCTATGG CTGCTCCTTT TGCAACTGGA GCGGCGGCTT TAGTATCTCA AAAGTTTCCT
TTTTTAAACG GCAAACAGAT AGGAGATCTG CTGCTTAGCA CTGCAAACAG CAATATAAAA
CTGCCAAAAA TGGTTTTAAA AAATATCACA AACAATAAAA GTAAAAAACT ATTTGTAAGC
TTAATTTACG TAGATAATGC AATTCCTACT ATGGCAGACG GTTCTCTTGA TTGGACACAG
ATAAATAAAG ATAGGATAGA AGCGGGTTAT ACAGATGAGG AGATTGCAAA ATTTTATACG
CAGTACTTCA AAAAATACTC TATCAAAACA ACAGACAAAC AAATTCAAAA ATATATCGCT
GAACAAATAG ATTTTATTAG TGATATAAAT AATATTCAAG TATCTTCTAT AACCAAAGAA
GAACTTATAG GTCAAGGTAT CTTGGATATC AAAAAAGCCA TGAACGGACT AGCGCTTTTA
GACGCAAATA GACTTACTCT AAATGATATT TTAAATTATG GAAATGAACA AGCGCTTTAT
TACACTATAG ACACAAATGG ATATAACGCT ACTTTTGCAA ACGATATAGC CCAAAGAAAA
TATAATCCGC TATGGCACTA TAAAGGCGGA GAATATAGTA TGCATGATCT AAACGTAGGA
TTTATAAAAG ACGGTGGCGG TATTTTAACT CTTAGCGCAG ATGCTTTTTT TGAAGGAAAT
ACTATAGTAA GAAACGGGGG ACTAAAGCTG TTTAGAATAG GCAATAAAGG CGGAGAGATT
AAAAATAGTA ATGTTTTTGT AGAGCAAGCC GGTACATTAA GCGGAAATGG AATTATCCAA
AAAAATCTGT ACAATCAAGG CATAGTTCGA CCAGGAAATG AAGATTTAAG CGATTTAATC
GTAAATGGAA CATATACTCA AAACGGAGAA AATGCATCAC TTCAGATAGA CGTTGCAAAT
TTAGCTAAAA ACAACTCTAA ATTAATAGCT AATAACTATG ATATCAAAAA CTCAAAGCTT
GTGTTTATAC CTCTTACGGA TACATTTTAT GAAAAAAATA CAAAAATAAA ACTAGATTTA
GGAAATTTAA AAAATCATTT AAATTCATTT AGCACTATAG GGTTAGAAAA ATCCTTAACT
TTGGATTTTG ATATATCTCA AGACAAAGAA AGCATTGTAT TTAAAGGAGT TAAAAACGGA
GCTTATGATA TAAAAAACTC GGGCATCGGA GCAAGTTTAA GAGATATTCG CTATAAGCTA
AATGATCCAA ATTTAAATAG ACAAAATCTC TATAAAGATT TTTTTAAAAA CTTAGATACA
AGCAAAGATA TAAGCAGTAT ACAAAACACG GTAAAAAGTA TAGATAATCA AAGCTATCTA
TCAAATATCT CGGCTTTAAT AGAAGATCAA GCAAAAATTA CACAAAATTA TACTATTTTT
GCTATAAATA ACAATTTATC AAACACGCTC TTTGCGCCGA ACAACGACTA TGCTAAGAAC
AAAGAATATT TTTGGTATGC GGCTCCAAAT TACAAAAAAA CAGATGCGGA TGAGTATAAA
GGACGCAAAA TAGGAACTGA TTTTGGTTTT GGAACTAGTA TGAGCGACAA TGGACAAATT
TCATTAAATT TAGGAGCAAG CAATACAAAA AATAAATTTA ACGAATCTAA TTACGAAACA
GATAGTATAA ATGCGGGTAT AAACTATATT TATGATTTTC AAAATTTTAA AGTGCTAAGC
GCGGCTGCTT TAGGATACGG CAAAAACACG CTAGATCTAA GCTCAAATCC GATTCTTAGC
AGCAGCTCGA AATCAAATTA TAACCATTTT ATAGCAGGAG CTATGATGGG CTTAGCAAAA
GATTTTGAAT TTAATAATAT CATTTTAACT CCGATTAGCT ACGTGAATTA TAACTATATT
TATCAAGAAG GATTTGATAT AAATAGCAAT ATTTTTGCTA GAAAAGTTGA TAGCATCTCT
CATCATACAA CCAGTATAAA TGCCGGACTA AACTTAGCTT ATTTAAATAA AAATCAAAAC
ATAACTACAA AGCTATCGAG TTACGCTATT TATGAGTATC GTTTAAGTGG AAAAGATATC
AAAAACTCAT CTAAATTTAT AGATTTTAGT TCTAACGGTT TTACTCAAAA ATATGAATTA
AGTGAACATT TACTCACTAT AGGAGCAAAT TTAGAAATGC TATATCCAAA CGACGTTTTT
ATAAGATTTA GCACAGCAGC AAATATACAA CAAGATGCAA AAAGCCTAAA TTTGACGGCA
ACAATAGGAA AAATGTTTTA A
|
|---|
| Protein sequence | MKKSDKMVII ALCTFLNSYI FALEPNFEKD LDIINTKSAY EQGITGQDVF IGIFDDDFRL
EHSSLNDQIL EALTFSDQTK ANYWNYNSHG SQVAAIALGA FNNPIMHGVA YNAKGYGMQA
PASLDAFNHI KENLDAEYKF FGDPNKNIKI INNSFGDFVF PILHIDATED FYELTQDEVE
DYIIEAMDQT NANSSIIRLS KEKQILNIFA AGNSGISSPS TLASLPHYDQ DLNAWLAVGA
IDSSKVTKLG DEGFDMSKPF AFTDFSNAFK GTAYFSILTP GEYIWSADSA TTNGFVPEQG
TSMAAPFATG AAALVSQKFP FLNGKQIGDL LLSTANSNIK LPKMVLKNIT NNKSKKLFVS
LIYVDNAIPT MADGSLDWTQ INKDRIEAGY TDEEIAKFYT QYFKKYSIKT TDKQIQKYIA
EQIDFISDIN NIQVSSITKE ELIGQGILDI KKAMNGLALL DANRLTLNDI LNYGNEQALY
YTIDTNGYNA TFANDIAQRK YNPLWHYKGG EYSMHDLNVG FIKDGGGILT LSADAFFEGN
TIVRNGGLKL FRIGNKGGEI KNSNVFVEQA GTLSGNGIIQ KNLYNQGIVR PGNEDLSDLI
VNGTYTQNGE NASLQIDVAN LAKNNSKLIA NNYDIKNSKL VFIPLTDTFY EKNTKIKLDL
GNLKNHLNSF STIGLEKSLT LDFDISQDKE SIVFKGVKNG AYDIKNSGIG ASLRDIRYKL
NDPNLNRQNL YKDFFKNLDT SKDISSIQNT VKSIDNQSYL SNISALIEDQ AKITQNYTIF
AINNNLSNTL FAPNNDYAKN KEYFWYAAPN YKKTDADEYK GRKIGTDFGF GTSMSDNGQI
SLNLGASNTK NKFNESNYET DSINAGINYI YDFQNFKVLS AAALGYGKNT LDLSSNPILS
SSSKSNYNHF IAGAMMGLAK DFEFNNIILT PISYVNYNYI YQEGFDINSN IFARKVDSIS
HHTTSINAGL NLAYLNKNQN ITTKLSSYAI YEYRLSGKDI KNSSKFIDFS SNGFTQKYEL
SEHLLTIGAN LEMLYPNDVF IRFSTAANIQ QDAKSLNLTA TIGKMF
|
|---|
| |