| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CFF8240_1771 |
|---|
| Symbol | dapF |
|---|
| ID | 4539033 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter fetus subsp. fetus 82-40 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008599 |
|---|
| Strand | - |
|---|
| Start bp | 1731180 |
|---|
| End bp | 1731923 |
|---|
| Gene Length | 744 bp |
|---|
| Protein Length | 247 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 639747119 |
|---|
| Product | diaminopimelate epimerase |
|---|
| Protein accession | YP_892886 |
|---|
| Protein GI | 118475771 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0253] Diaminopimelate epimerase |
|---|
| TIGRFAM ID | [TIGR00652] diaminopimelate epimerase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 44 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAACTCT CAAAATATAA TGCCAGCGGA AATGACTTTG TTATATTTCA TACGTTTAAA
AGCTTGAATA GAAGAGAGTT GGCTATGAGT TTATGTGATA GATTTAACTC TATAGGAGCA
GATGGACTTA TAGTTATTTT GCCCAGCAAA GAGTGTGATT TTGAATGGGA GTTTTACAAT
AGCGATGGGA GTTTAGCATC AATGTGCGGA AATGGTTCAA GAGCAGCCGC GCTTTATGCT
TATCAAAACT CACTATGTTC CAAAAACTGC TCATTTAAAA CAGGTGCAGG GATCATAAAA
GCGAGCATAG ACAATGATTT TGTAGAAGTG GCTTTAACGG CGCCAAAAAA GCTGAGTGAG
CCATTTATAG AGTACGGTTT TGAGTGGAGT TTTTATGATA CGGGAGTTCC TCATTTAGTA
ACTTTTGTAG ATAATCTTTC TAAATTTGAT CTCAGCGTTT GTTCCGAACT TAGAAAAAAA
TACAACGCAA ATGTAAATTT CGCTCATCTA AAAGACAACG GAGTTTTAGA GGTGCGCACG
TTTGAGCGTG GAGTTGAAAA CGAAACAAAT GCTTGCGGTA CCGGTATGGC GGCTTCATTT
TATACTGGAG TCGATCGTTT TAAATTTAAT CCCTGTTTAA AAGTAAATCC AAAAAGCAAA
GAGGATTTAT GGCTTAAATT TGATGGCGAA ACTATATATT TTAAAGGCAA GGTCAAACAC
TGCTTTGATA CGAGTATTAG TTAA
|
|---|
| Protein sequence | MQLSKYNASG NDFVIFHTFK SLNRRELAMS LCDRFNSIGA DGLIVILPSK ECDFEWEFYN
SDGSLASMCG NGSRAAALYA YQNSLCSKNC SFKTGAGIIK ASIDNDFVEV ALTAPKKLSE
PFIEYGFEWS FYDTGVPHLV TFVDNLSKFD LSVCSELRKK YNANVNFAHL KDNGVLEVRT
FERGVENETN ACGTGMAASF YTGVDRFKFN PCLKVNPKSK EDLWLKFDGE TIYFKGKVKH
CFDTSIS
|
|---|
| |