Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CFF8240_1742 |
Symbol | rnc |
ID | 4539074 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter fetus subsp. fetus 82-40 |
Kingdom | Bacteria |
Replicon accession | NC_008599 |
Strand | - |
Start bp | 1698612 |
End bp | 1699283 |
Gene Length | 672 bp |
Protein Length | 223 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 639747092 |
Product | ribonuclease III |
Protein accession | YP_892860 |
Protein GI | 118474451 |
COG category | [K] Transcription |
COG ID | [COG0571] dsRNA-specific ribonuclease |
TIGRFAM ID | [TIGR02191] ribonuclease III, bacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATAAAT TAAATAGATT AGAAGAGCAT TTAGGTTATA AATTTAAAAA TAAAACGTTG CTAAAAGAGG CGCTAACTCA TAAGAGTATG AAAAGTAGCG TAAATAATGA GCGGCTCGAG TTTTTAGGAG ATGCTGTTTT GGATCTTATA GTAGGAGAGT ATCTATTTTT TAAATTTAAA GATACGGATG AGGGAAATCT CTCAAAGCTA AGAGCGGCTT TGGTAAATGA AAAGAGTTTT GCAAGTATAA GTTCGCAGAT AAGATTAGGA GATTTTTTGT ATCTGTCTGC TGCCGAGGAT AATAATAACG GAAGAAATAA GCCAAGCTTA GTTAGCGATG CTTTAGAAGC ACTTATGGGA GCTATATATT TAGAAAGCGG TTTAGAAGCG GTCAAAAAAA TTTTTATAAA TCTTTTAGAA TCTCAGTATA ATAATATAGA CTTACAAAGC CTTGGGAAAG ACTATAAAAC GACTTTACAA GAGATTACTC AAGCGAGGTT CGGCGTTACG CCTAGGTACG AGCTTGTAAG TTCAAGCGGA CCGGATCATA AAAAAAGTTT TGAAATGGCT GTTTTTTTAA ACGACAAGGA GCTTGCTCGC GCTATTGGAA ATAGCAAAAA AGAGGCTGAA CAGAGTGCTG CGTGGAAAGT TTTGCAAGGA ATGAATATAT GA
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Protein sequence | MDKLNRLEEH LGYKFKNKTL LKEALTHKSM KSSVNNERLE FLGDAVLDLI VGEYLFFKFK DTDEGNLSKL RAALVNEKSF ASISSQIRLG DFLYLSAAED NNNGRNKPSL VSDALEALMG AIYLESGLEA VKKIFINLLE SQYNNIDLQS LGKDYKTTLQ EITQARFGVT PRYELVSSSG PDHKKSFEMA VFLNDKELAR AIGNSKKEAE QSAAWKVLQG MNI
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