| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CFF8240_1735 |
|---|
| Symbol | |
|---|
| ID | 4539321 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter fetus subsp. fetus 82-40 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008599 |
|---|
| Strand | + |
|---|
| Start bp | 1691059 |
|---|
| End bp | 1693455 |
|---|
| Gene Length | 2397 bp |
|---|
| Protein Length | 798 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 30% |
|---|
| IMG OID | 639747085 |
|---|
| Product | diguanylate cyclase/phosphodiesterase, putative |
|---|
| Protein accession | YP_892853 |
|---|
| Protein GI | 118475122 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2200] FOG: EAL domain |
|---|
| TIGRFAM ID | [TIGR00229] PAS domain S-box |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.119349 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTTCTGG TGTTATCTCT TTTTTGTGCG TATTTTATAT TTCACACTAG TGAAATTATA
TCAAAAAATA ACTTTTGGCT TGACAAAGCA TCGGAGATAA AAATATTAAA TAACGATATA
GATATTCAAA TGTCTAAACA ACTATCTATG ATAAATTACG ATGATATGAA CGCTAAAATA
ACAGAGATAA ACAGACTTAT TCACGAAATA GAGATGTCAA AAGACTTTTC TAAATTTTTC
TTTAAGATCA AAAATAAAAA GATATTTATG GGCCTAAAAA AGGCTATAGA AAACAAAAAA
ATTATCATAG AAAAATACCA AACTCTAAAA TCAATATCAA GCAATGATCT TGTATACATA
AGTCAAAATA TACAATACGC ATCAAATTTA AAGTTTGTAA GCAAACTATA CTCGTATATA
ATTCTTAGCA AGTTAGGAAC AGAGTTTAAC GCAACTATGT TCAATCACGA TATAAATATG
CAATTAAACA ATATAGGAGA TACTAAAAGT TTTGATTATT CTCTTTTAAG CGCCATTAAA
GATGTAGGAA ATAGTATTTT AGCGCTTTCA AATTTATCGT ACGATAATAT AAATTTAAAA
ACCACGCAAA AAATAGACGC CTTTTTAAAT GCTATAAATA AGCATTTCAA ATCAAACATC
AATGATCTTA TGATAAGCGT AGTCGTACTT TTGTTTATTA TTATATTATC ATCTACTAGA
AATATCTATA CAAGCGTAAA AAATAGAAAA AATGCAGCCA AAATAAACCA GATGGGAGAT
ATGATAGCAA ATAGTCCAAA TCAAATTTTA ATCATAAATC GAGAAGGCAA AATCATAGAT
GCAAATCCTG CTTTTGAACA GATAAGCGGA TATAAAAAAT CAGAAGTTTT AAATAAAACT
TTAAGCTTCT TAAATACAAA TTTAAAAGGT ACAAATATCT ATGACGATAT ACTCCAAAGT
AAGCAAATCT GCAGATATAA CGAGTTTATA AGCAAGTCAA AAAAAGGACT TTTGATATAT
GAAAAAATAA TAGCCATACC GACTTTAGAC GAGTATTCAC AAATATCTGG AGCTATCATA
GTCAAACAAG ATATCACAAA AGAAAGACTT ATAGCAAAAG AGCTTGGATT TAAAACTGCA
GAGATAAGAA ACAGCGCTCT AACAGATAAA CTAACAGGTT TAGGAAATCA CATAGCGCTT
ATGGAAAAAA TAGATGATAA GAAAAAAGGT ATCGTCATCT ATATAAATGT AAATCACTTT
TCAAATTTAA GATTTTTTTA TAAAACATCG ACTGTGGATC TTATATTAAC TGCGATATCA
GAAACGCTTA AACTATGCAT AGAAACATAT AAAATGAACT CAAGCATATA CAGAATACAA
CTAGATGAGT TTTGTATATG GTATGAAGGA AGCAATATAA ATAAAGATGT AAAACATATC
TTAGAGTATT TTAAGGTAAA AAATATAGAC ATAATAACAA GCGAAGGCAG AGAAATATTA
CCAAATATAA ATATCACAAT GGGCGTTAGC ATGGAGGCAG ACACTCCAAA TACAAACCGC
CTCACTCAGT CTATCTTAGC TCACCATGAA GCGATATCGA ACGACCAAAA TATAGCATTT
TATCAAGATA ACAACATAAT AGAACAACAA TATCATAAAA ACCAGCTAAT CTCAAGAATG
ATACAATACG CACTAAATGA AAATAGAGTT ATAGTCGAGT GTCAAGGCAT ATTTGATATT
AGATCAAGCA ATAAACCTAT ATTGTCGTCA TATGAAATTC TAATACGCAT CATAGATTCC
GAAAATAAAA TACACTATCC CGGAGAGTTC TTAGGAGTAG CAAAACAAAC ATCGCTTTAT
ATAGCACTCA CAAAACAAGT TATAAGCAAA GCTTTTGATC TATTAGAAAC ATTTTGCGAT
AAAAAGTTTT CTATAAATTT ATCAAGCATA GACATGGTAA ACGAATCTGT TAAAAAGCTA
TTTATGCAAA AACTTTCTCT TTGCTCACAG CCTAGCCACC TTACTGTAGA AATATTAGAA
AGTGAAGGTA TAGACGACTA TGCATCGATA AATCCATTTA TAGAAAGCAT AAAAGATCAC
GGATGTAAAC TCTCTATAGA TGATTTTGGA AGCGGATACT CAAACTACTA TAGAATGCTT
GAGCTTGACA TCGATTACTT AAAAATAGAC GGTTCGATCA TCAAAAAACT TCCGTTTGAC
GAAAATGCAA GAAGCGTCGT ACAAACTATA GTAGAGTTTG CAAATAGACA AAAATACGAT
GTTGTAGCCG AGTTCGTATC ATCTAATGAA ATTTTAGAAC AAGTACTTAG CTACGGTATA
AAATACGCTC AAGGCTTTTT ACTTGGCAAA CCTATTCATC CTAGTAATAT AGATTAG
|
|---|
| Protein sequence | MVLVLSLFCA YFIFHTSEII SKNNFWLDKA SEIKILNNDI DIQMSKQLSM INYDDMNAKI
TEINRLIHEI EMSKDFSKFF FKIKNKKIFM GLKKAIENKK IIIEKYQTLK SISSNDLVYI
SQNIQYASNL KFVSKLYSYI ILSKLGTEFN ATMFNHDINM QLNNIGDTKS FDYSLLSAIK
DVGNSILALS NLSYDNINLK TTQKIDAFLN AINKHFKSNI NDLMISVVVL LFIIILSSTR
NIYTSVKNRK NAAKINQMGD MIANSPNQIL IINREGKIID ANPAFEQISG YKKSEVLNKT
LSFLNTNLKG TNIYDDILQS KQICRYNEFI SKSKKGLLIY EKIIAIPTLD EYSQISGAII
VKQDITKERL IAKELGFKTA EIRNSALTDK LTGLGNHIAL MEKIDDKKKG IVIYINVNHF
SNLRFFYKTS TVDLILTAIS ETLKLCIETY KMNSSIYRIQ LDEFCIWYEG SNINKDVKHI
LEYFKVKNID IITSEGREIL PNINITMGVS MEADTPNTNR LTQSILAHHE AISNDQNIAF
YQDNNIIEQQ YHKNQLISRM IQYALNENRV IVECQGIFDI RSSNKPILSS YEILIRIIDS
ENKIHYPGEF LGVAKQTSLY IALTKQVISK AFDLLETFCD KKFSINLSSI DMVNESVKKL
FMQKLSLCSQ PSHLTVEILE SEGIDDYASI NPFIESIKDH GCKLSIDDFG SGYSNYYRML
ELDIDYLKID GSIIKKLPFD ENARSVVQTI VEFANRQKYD VVAEFVSSNE ILEQVLSYGI
KYAQGFLLGK PIHPSNID
|
|---|
| |