Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CFF8240_1731 |
Symbol | |
ID | 4538379 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter fetus subsp. fetus 82-40 |
Kingdom | Bacteria |
Replicon accession | NC_008599 |
Strand | - |
Start bp | 1688063 |
End bp | 1689472 |
Gene Length | 1410 bp |
Protein Length | 469 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 639747081 |
Product | periplasmic solute binding protein |
Protein accession | YP_892849 |
Protein GI | 118474685 |
COG category | [R] General function prediction only |
COG ID | [COG3443] Predicted periplasmic or secreted protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACAAAT TTCTTTGCGT TTTATGTATA GGCGCTGCAT TTATATATGC AAAACCAGTT GTAACTACTA GCATTTTACC TACGAAGTAT TTTGTTGAGC AAATAGCAGG AGATAGTGTA GACGTAAATT ATATGGTAAA TGCCGGTGCC GATCCTCATA TTTATGAGCC GCGTCCCGAA CAGATGAAAA ATCTAGAAAA AAGCGATATA TTTTTTGCCG TTGGAATGGA ATACGAAAAT ACGTGGCTTC CAAGATTTGC TAAAAGCTAT CCGAGCTTAG ATATAATCAA AACTCAAAAA GGTGTTCCGC TTATAACTAG CGAGGCTCAT GAGCATGGAG ATCACGACCA TGAAAAACAC GATCACGCTA AACAACATAA AGATAGTTAT TACGGAATTT TTGATGATAA TGATGTAAAA GATAGAGATA TCAGCGACTG GAACGGAGAT TTTAATAGTG TATATCCGTA TTTGATCGAT GGTAGTCTTG ACCCTGTTTT AGAAGCCAAG GCAAGCTCTC CAAATAGTGA TAAAAATTTC AACGAGTATA AAAAACAGTA TGAAAAAGGC TATAAAAGCA GTATAAATCG TATAGTTATA AACAACGGTA ATATAAGTTT TTATACTTCT AACGGTGTAA ATACTGGAAA ATATGCTTAT AAAGGTTATG AAATTCTAAC ATATAAAAGC GGTAAAAAAG GTGTCAGGTA TCAGTTGGAA AATATAGATA AAAATAGTAA TGCACCTAAA TTTATTCAGT TTAGCGACCA TGAGATCGGT CCTGCAAAAA TCTCTCATTT TCATATTTAT ATGGGAGATG ATAGTTTTAA AACTCTTAGT TTAGAACTTG AAAATTGGCC TACTTTTTAT AAATCAAATA TGAAAAAAGC AGATATCATA GAAGATATGT TAGAACATAT AGACAGGAAT TTTGATACTC ATATCTGGGT TGATCCTCTT CTTGTTAAAA TACAAGCTAA AAATATAGCT GACGCTTTAA TAGCTCATTA TCCTAAAAAT AAAGCTTTAT ATGAAGCAAA TTTAGCTAAA TTTCAAAATG AACTTGATAT GCTAGATAGT TATATAAAAG AGCAACTAGC TTCTGTAAAA AATAGAAATT TCATAGTTTA CCATCCGTCG TGGGCGTATT TTGCTAAGCG CTACGGCTTA AATCAAATAG CTATAGAGGC TGAAGGAAAA GAGCCAAAAC CGGCTCAGTT GGCAAATATC ATAAAAGAAG CCAAAGAAGA GAACGTAAAA GTTATCTTTG TAGCGCCGCA GTTTTCTAAA AAAGCAGCAC AGCTTATAGC TAAAGAAGCC GGTGCAAATG TTGTAGAGAT AGATAATTTA GCCGAGGATT GGGTAGAAAG TATGAAAAAT ACGGCAAATG CATTTAAAGA AGGTTTATGA
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Protein sequence | MNKFLCVLCI GAAFIYAKPV VTTSILPTKY FVEQIAGDSV DVNYMVNAGA DPHIYEPRPE QMKNLEKSDI FFAVGMEYEN TWLPRFAKSY PSLDIIKTQK GVPLITSEAH EHGDHDHEKH DHAKQHKDSY YGIFDDNDVK DRDISDWNGD FNSVYPYLID GSLDPVLEAK ASSPNSDKNF NEYKKQYEKG YKSSINRIVI NNGNISFYTS NGVNTGKYAY KGYEILTYKS GKKGVRYQLE NIDKNSNAPK FIQFSDHEIG PAKISHFHIY MGDDSFKTLS LELENWPTFY KSNMKKADII EDMLEHIDRN FDTHIWVDPL LVKIQAKNIA DALIAHYPKN KALYEANLAK FQNELDMLDS YIKEQLASVK NRNFIVYHPS WAYFAKRYGL NQIAIEAEGK EPKPAQLANI IKEAKEENVK VIFVAPQFSK KAAQLIAKEA GANVVEIDNL AEDWVESMKN TANAFKEGL
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