Gene CFF8240_1719 details

Gene Information

• Locus tag: CFF8240_1719
• Symbol: prfA
• ID: 4538623
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Campylobacter fetus subsp. fetus 82-40
• Kingdom: Bacteria
• Replicon accession: NC_008599
• Strand: +
• Start bp: 1678469
• End bp: 1679536
• Gene Length: 1068 bp
• Protein Length: 355 aa
• Translation table: 11
• GC content: 42%
• IMG OID: 639747069
• Product: peptide chain release factor 1
• Protein accession: YP_892837
• Protein GI: 118475342
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0216] Protein chain release factor A
• TIGRFAM ID: [TIGR00019] peptide chain release factor 1

Plasmid Coverage information

• Num covering plasmid clones: 32
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTTAGCTG ACAAACTACG TCCATTTATA GATCGCTACA ATGAGTTAAA CTCTATTCTT 
AGCGATCCAG AAGTCATAAA CGATATATCT CGTATGACTA AACTCTCAAA AGAGCAAAGA 
AACTTAGAAT CCATAAAAGA CGCTACTCAA AGATACTTAA GTATCTTAAA CGGTATAGAA 
GAAAATAAAA CTCTACTTGA AGATCCAGAA CTAGGCGAAC TAGCTAAAGA TGAGCTAAAA 
GCGCTAGAAA CAGAGCTTCC GAAACTAGAA GAAGAGATAA AACTTCTACT TCTTCCAAAA 
GATCCAAACG ATGAAAAAAA TATCTTTTTA GAGCTACGCG CCGGTACAGG AGGCGATGAA 
GCTGCCTTAT TTGTAGGAGA CTTAGCTACT GCGTATATAA GATATACCGA AGAGCGGGGC 
TATAAATACG AGATAGTAAG TTCAAGCGAA GGAAGTGCGG GCGGATATAA AGAGCTGATT 
TTACTCATAA AAGGCGAAGG TGCTTACTCA AGACTTAAGT ATGAAGGCGG AACTCACAGA 
GTTCAAAGGG TACCAGAAAC AGAAAGTCAA GGTAGAGTGC ACACTTCGGC TATCACAGTA 
GCCATCATGC CAGAAGTAGA AGATAGCGAG ATAGATATAA ATCCAAACGA TCTTAAAATA 
GACGTTATGA GAAGCTCGGG TCATGGCGGA CAGTCGGTAA ATACCACAGA CAGTGCCGTG 
CGCGTAACTC ACATACCAAC AGGCTTAGTC GTAGTCAATC AAGACGGTAA AAGCCAACAC 
AAAAACAAAG ACGCCGCTAT AAAGGTCTTA AAAGCTAGGC TTTACGATAT GCAAGAGCGC 
GAACGCAGAG AAAAAGAAAG CAAAGAGAGA AAAGATCAAG TCGGCACCGG AGATAGAAGC 
GGTCGTATCC GCACGTACAA TTACCCACAA AACCGCATCA GCGATCACCG CATAAATCTC 
ACTCTTTATA GGCTAGATGC GATTATGGCA GCAGGACTTT TTGATGAGAT CATAGACCCG 
CTCATCGCGC ACTACCAAGC AGAAGCCATA GCAAACGCCG GACTATAA 

 

Protein sequence

MLADKLRPFI DRYNELNSIL SDPEVINDIS RMTKLSKEQR NLESIKDATQ RYLSILNGIE 
ENKTLLEDPE LGELAKDELK ALETELPKLE EEIKLLLLPK DPNDEKNIFL ELRAGTGGDE 
AALFVGDLAT AYIRYTEERG YKYEIVSSSE GSAGGYKELI LLIKGEGAYS RLKYEGGTHR 
VQRVPETESQ GRVHTSAITV AIMPEVEDSE IDINPNDLKI DVMRSSGHGG QSVNTTDSAV 
RVTHIPTGLV VVNQDGKSQH KNKDAAIKVL KARLYDMQER ERREKESKER KDQVGTGDRS 
GRIRTYNYPQ NRISDHRINL TLYRLDAIMA AGLFDEIIDP LIAHYQAEAI ANAGL