Gene CFF8240_1690 details

Gene Information

• Locus tag: CFF8240_1690
• Symbol: def
• ID: 4539383
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Campylobacter fetus subsp. fetus 82-40
• Kingdom: Bacteria
• Replicon accession: NC_008599
• Strand: -
• Start bp: 1653664
• End bp: 1654182
• Gene Length: 519 bp
• Protein Length: 172 aa
• Translation table: 11
• GC content: 31%
• IMG OID: 639747041
• Product: peptide deformylase
• Protein accession: YP_892810
• Protein GI: 118475317
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0242] N-formylmethionyl-tRNA deformylase
• TIGRFAM ID: [TIGR00079] peptide deformylase

Plasmid Coverage information

• Num covering plasmid clones: 27
• Plasmid unclonability p-value: 0.736434
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATTTTAG ATGTAATTAC CTATCCCGAT AAAAGACTTT TTGAAAAAAG CGCAGACGTT 
GTCAAATTTG ATAATGAGCT AGCAAAGTTT TTAGATGATA TGTATGATAC AATGATAGCA 
AAAAACGGCA TAGGGTTAGC TGCTATACAA GTCGGTAAAC CAATTAGAGT TTTTATAATA 
AATTTAATAA ACGAAGATGA AGTGCAAGAT AAAAATGATC TTTTAGAGAT AATCAATCCA 
AAATTTATAT CCAAAGACGG TGAAATCGTA TATCAAGAAG GCTGCCTTAG CGTACCTGGG 
TACTATGAAG ATGTGAAACG TGCTAAAGAT ATTAAAATAC AGTTTCAAGA TAGATTTGGA 
AATTTAAAAG AGCTAGAAGC AGATGGACTT TTGTCTGTGG CTATTCAGCA TGAAAACGAT 
CATTTAGACG GACATCTTTT TATAGAAAAA ATTGGATTTA ACAAACGCAA AAAATTTGAT 
AAAGAGTACA AGAAAAAATC AAAGCTAAAA CCGATATGA 

 

Protein sequence

MILDVITYPD KRLFEKSADV VKFDNELAKF LDDMYDTMIA KNGIGLAAIQ VGKPIRVFII 
NLINEDEVQD KNDLLEIINP KFISKDGEIV YQEGCLSVPG YYEDVKRAKD IKIQFQDRFG 
NLKELEADGL LSVAIQHEND HLDGHLFIEK IGFNKRKKFD KEYKKKSKLK PI