Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CFF8240_1560 |
Symbol | |
ID | 4539051 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter fetus subsp. fetus 82-40 |
Kingdom | Bacteria |
Replicon accession | NC_008599 |
Strand | - |
Start bp | 1532184 |
End bp | 1533431 |
Gene Length | 1248 bp |
Protein Length | 415 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 639746918 |
Product | NADP-dependent malic enzyme |
Protein accession | YP_892693 |
Protein GI | 118474896 |
COG category | [C] Energy production and conversion |
COG ID | [COG0281] Malic enzyme |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.00518562 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATTTAA GACAAAGGGC TTTGGACTAC CACGAAGGCG GCAAAATAGA AATAAATGTT AAAAAACCTT GCAAAACTGC AGATGACTTA AGCGTGGCTT ATAGTCCAGG AGTTGCAGAG CCTTGCAAAG AGATAGAAGC GGATAACGAA TTAGCTTATA GATATACGAA TAAAGGCAAC CTTGTTGCAG TTATCACAGA TAGTACAGCC GTGCTAGGTC TTGGAGATAT AGGCGCTGTT GCCGGAAAGC CTGTTATGGA AGGTAAATCC GTTTTATTTA AAAAATTCGC AAACGTGGAT GCGTTTGATA TCGAGCTTGA TGAGCACGAT CCAGACAAGA TAGTTGAGAT CTGCAAAGCT CTTGCTCCAA CATTTGGCGG TATAAATTTA GAAGATATCG GCGCACCAAA ATGTTTTTAC ATAGAGAAAA AACTTCAAGA GAGCGTAAAT ATCCCAGTTA TGCACGATGA TCAGCACGGA ACTGCTATTA TAACGACTGC AGGACTTATC AATGCTCTAA AAATCACAGG CAAAAAAGTT GGCGAGATAA AAGTCGTAGT TAGCGGAAGC GGCGCGGCTG GAATCGCATG CGCGAAAATG TATAGAAATC TTGGTGTAAA ACATATCGTA ATGTTAGATA GCAAAGGCGT TATACATACT AAAAGAGAAA ATTTAACTCC TGAAAAAGCT GATTTTGCTA TAGATACGGA CGCTAGAACT TTAGCTGATG CGATGAGAGG TGCTGATATG TTCCTCGGTC TTTCAAAAGC CGGTGTTTTA AGCAAAGATA TGGTTGCTAG CATGGCATCA AATCCTATAA TATTTGCCTT AGCAAATCCA ACTCCTGAGA TCATGCCTGA AATCGCTCAC TCCGTAAGAG ATGATATAAT GATGGGAACA GGAAGAAGCG ACTATCCAAA TCAAGTAAAT AATGTTTTGG GATTTCCGTT TATATTTCGC GGTGCGCTAG ACGTAAGAGC TACAAAAATT ACTGAAAATA TGAAAATAGC GGCAGCGCAT GCTTTAGCCG AGCTCGCCGA AGAATACGTA CCAGATAGCG TTTTAGAAGC TTATGGCGAA AAAGATATTA AATTTAGTAA AGATTACATT ATACCAAAAC CATTTGATCC TAGAGTTCTT TTGGTGGTAG CCCCGGCAGT TGCCGAAGCA GCCGTAAAAG ACGGAGTTAC TTTGGTTAAA GATTTTGATA AATCGGCTTA TATAGAAAAG CTTAAAAAAT TATTTTAA
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Protein sequence | MDLRQRALDY HEGGKIEINV KKPCKTADDL SVAYSPGVAE PCKEIEADNE LAYRYTNKGN LVAVITDSTA VLGLGDIGAV AGKPVMEGKS VLFKKFANVD AFDIELDEHD PDKIVEICKA LAPTFGGINL EDIGAPKCFY IEKKLQESVN IPVMHDDQHG TAIITTAGLI NALKITGKKV GEIKVVVSGS GAAGIACAKM YRNLGVKHIV MLDSKGVIHT KRENLTPEKA DFAIDTDART LADAMRGADM FLGLSKAGVL SKDMVASMAS NPIIFALANP TPEIMPEIAH SVRDDIMMGT GRSDYPNQVN NVLGFPFIFR GALDVRATKI TENMKIAAAH ALAELAEEYV PDSVLEAYGE KDIKFSKDYI IPKPFDPRVL LVVAPAVAEA AVKDGVTLVK DFDKSAYIEK LKKLF
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