Gene CFF8240_1547 details

Gene Information

• Locus tag: CFF8240_1547
• Symbol: selB
• ID: 4538331
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Campylobacter fetus subsp. fetus 82-40
• Kingdom: Bacteria
• Replicon accession: NC_008599
• Strand: +
• Start bp: 1521275
• End bp: 1523080
• Gene Length: 1806 bp
• Protein Length: 601 aa
• Translation table: 11
• GC content: 31%
• IMG OID: 639746905
• Product: selenocysteine-specific translation elongation factor
• Protein accession: YP_892680
• Protein GI: 118474130
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG3276] Selenocysteine-specific translation elongation factor
• TIGRFAM ID: [TIGR00231] small GTP-binding protein domain; [TIGR00475] selenocysteine-specific elongation factor SelB; [TIGR00485] translation elongation factor TU

Plasmid Coverage information

• Num covering plasmid clones: 38
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAATAGCA TAATAATAGG AACCTCAGGT CATATAGATC ACGGAAAAAC AGCACTTATC 
AAAGCTTTAA ACGGCTATGA AGGCGACAAA ACATCAGACG AGATAAAACG CGGTATTACG 
ATAGATCTTA GTTTTTCAAA TTTAAATAAC GGAATTAAAA ATATAGCATT TATCGATGTT 
CCTGGTCATG AAAATTTAGT CAAAACTATG ATAAGCGGAG CATTTCAATT TGACGCTTGT 
ATGCTCGTAA TAGCAGCCAA CGAAGGACTT AAGCCACAAA CAAAAGAGCA TATAGAAATA 
TTAAATTTAC TAAATGTAAA AAATATAATT TTAGTATTTT CAAAATGTGA TTTGGTAGGT 
AAAAATGAGC AATTAGAAGT CAAAAACAGT GTATTGGATT TTATAAAAGA TTTCTCGAAT 
TTAGAAATTT TAAGAAGTTT TTTCGTCAGT ATAAAAGATA AAAACAGCAT AGATGCGCTA 
AAAAATTATC TTTTTACGAT CCAAAGAAAA ACGCATGATC AAGACTCTGT TTTTCGCTAC 
TACATAGACA GAGTTTTTCA AGTAAAAGGT CATGGCACGG TCGTCACAGG AGGCGTATTA 
AAAGGCACTC TAAAAGTCGG GGAGCAAATT TTAAACTTGG ATTTAAATGA AAGTTTTATA 
TTAAGAAATT TAGAAGTTCA TTCTAGGAGC GCAAAGACGG TAGAAGCTCC AAATAGAGCC 
GCGTTAAACT TAAGCGGAGA TAAAACTTAC GCTTTAAAAA AAGGGCAAAT TTTAAGCAAA 
AAGGGATTTT GGAGAGGATT TTTTGAAGCT GATTGTTTTG TGAGCGGAGA TTTGACTCAC 
AATAGTGAAG TCGTTTTTTG CGTCGGATCT AAACAAGTCA ATGCAAAAGC CGCTCTTTTA 
AAAGACAATT TTTTTACATT TAAATTTAAT AAAATGATGT TTTTAGAGTT TAACGAGCCG 
TTTATTTTAC TGAAAAATAG CAGAGTTATA GGCGGCGGAT TTGTTCTAAA TCCAGTAAGC 
GAACCTCTTA AAAAAGATGT TAAGTCAGAT CTACTTTCAG CGCTCAATAA TATGGATTTC 
GTACAAGCTT TTGAGATTTT AAGCAGATCA CATAGACATG GTTTTGGACT TATATCGTCT 
TTGCAAAGAT TTGGAATGAG TACAAGCACG GCACTAGATA TAGCTTCAAA TTTAAAAAAT 
GTTTTTGTGG ATAAAAAAGC GGCTTGTATC TACACAAATG ACGGCTATAG CGATGTTAAA 
GAATTTATCA AATTTATAAT AAACAAAAAC AAAGACGCCA TGTTCTCTCC ATCTAGCATA 
AATACAAAGC TGTCTTGGGC AAGTACGGAT TTTATAGAAG CTGTTTTAAA TGAGCTAGAA 
ACAAATAAAA TAGTCCAAAA AAACGGAAGT ATTTATACTA AATTCGGAAC TAATTTCGAT 
GAATTAAATA CAACGGTAGA AAGTAAAATT TATGATATTT TAGAAAAAGG ATATATTACT 
CCAAAAGCAC CGTATAACAT ATATGATGAG CTTGATATCG ATAAAATAGT AGGAGACGCG 
GCTCTAAAAA AGCTCACAAA AGCAAAAAAA GTAGTAAGAC TAGAACACAA CCTTTTTATA 
AGCTCAAATG CATTAAATAA AGTGATAAAT ATGCTAAGAG ATATAATAAA AAATGAAGGT 
AAAGTAAACA TAACCAGCGT TAAAAATCAT CTAAATTTAA GTAGAAAATA TGCTTTGGCG 
TATTTAGAAT ATCTTGATAA ATTTGCCGAT ATCAAGAAAT TTGAAAACGA TAGGCTTTTT 
GTTTAA 

 

Protein sequence

MNSIIIGTSG HIDHGKTALI KALNGYEGDK TSDEIKRGIT IDLSFSNLNN GIKNIAFIDV 
PGHENLVKTM ISGAFQFDAC MLVIAANEGL KPQTKEHIEI LNLLNVKNII LVFSKCDLVG 
KNEQLEVKNS VLDFIKDFSN LEILRSFFVS IKDKNSIDAL KNYLFTIQRK THDQDSVFRY 
YIDRVFQVKG HGTVVTGGVL KGTLKVGEQI LNLDLNESFI LRNLEVHSRS AKTVEAPNRA 
ALNLSGDKTY ALKKGQILSK KGFWRGFFEA DCFVSGDLTH NSEVVFCVGS KQVNAKAALL 
KDNFFTFKFN KMMFLEFNEP FILLKNSRVI GGGFVLNPVS EPLKKDVKSD LLSALNNMDF 
VQAFEILSRS HRHGFGLISS LQRFGMSTST ALDIASNLKN VFVDKKAACI YTNDGYSDVK 
EFIKFIINKN KDAMFSPSSI NTKLSWASTD FIEAVLNELE TNKIVQKNGS IYTKFGTNFD 
ELNTTVESKI YDILEKGYIT PKAPYNIYDE LDIDKIVGDA ALKKLTKAKK VVRLEHNLFI 
SSNALNKVIN MLRDIIKNEG KVNITSVKNH LNLSRKYALA YLEYLDKFAD IKKFENDRLF 
V