| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CFF8240_1456 |
|---|
| Symbol | hemE |
|---|
| ID | 4537787 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter fetus subsp. fetus 82-40 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008599 |
|---|
| Strand | - |
|---|
| Start bp | 1437927 |
|---|
| End bp | 1438958 |
|---|
| Gene Length | 1032 bp |
|---|
| Protein Length | 343 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 639746817 |
|---|
| Product | uroporphyrinogen decarboxylase |
|---|
| Protein accession | YP_892592 |
|---|
| Protein GI | 118475174 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0407] Uroporphyrinogen-III decarboxylase |
|---|
| TIGRFAM ID | [TIGR01464] uroporphyrinogen decarboxylase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATTTTTA TAGATGCATG TTTTGGTAAG CCTACGCCTT ATACGCCTAT TTGGATGATG
CGTCAAGCAG GAAGATACCT ACCTGAATAT ATGGCTGTAA GAGACGCTGC AGGCGATTTT
CTATCTCTTT GTAAAGATTA TAAAAAAGCA AGTGAAGTAA CTTTACAGCC AGTTGATATT
TTGGGTGTTG ATGCTGCTAT AATGTTTAGT GATATCTTAG TAGTTCCTCT TGAAATGGGA
ATGGAGCTTA AATTTATAAA AGGCGAAGGT CCTGTTTTTG AAAATCCTAT TTTATCAATG
GATAGTTTAG ATAAGCTTAG TGTTGAAAAG GCGGTGAAAA ATTTAAGTTA TGTTTATGAT
ACTATAAAGC TTACTCGGGA GAAATTGAGT TCAGATAAAG CTCTTATAGG ATTTTGCGGA
GCTCCTTGGA CGATAGCTAC ATATATGATA GAAGGCGGCA GTACAAAAAC GTATAATATT
AGTAAAAAGA TGCTTTATGA TAATCCTCAA TTTCTGCATG CTATACTTCG TAAAGTTACA
AATGCGCTAA AACTTTATTT AGAAGAACAG ATAAAAGCCG GAGTAAATGC GGTTCAGATA
TTTGATAGTT GGGCTAGCGC ACTTGAGCAA AACGCATATC TTGAGTTTGG TTTTAGTTAT
ATAAATGAGC TGGTTGATTA CATAAAATCT CAATATCCCG ATATACCAGT TATCGTATTT
CCAAAAGGTA TAAGCGGATT TTTAAATAAG ATTGGCGGTA AATTTGATGT ATTTGGAGTT
GATTGGAGTA CTCCTCTTAA AATGGCTAAA GAAACTTTAG GATCTCGTTA CGTATTGCAA
GGAAATATGG AGCCTACAAG ACTTTATAGC AAAGACGCTA TAGACGATGG AGTAGATGAA
ATTTTAAGTA TTATGAGAGG TCATAGGCAT ATTTTTAATC TTGGTCATGG GATACTTCCG
GATGTGCCTG TTGAAAATGC AAAATATTTT ATAAAATCCG TTCAAGAAAA ATCAGCAAAA
TACTGTAAAT GA
|
|---|
| Protein sequence | MIFIDACFGK PTPYTPIWMM RQAGRYLPEY MAVRDAAGDF LSLCKDYKKA SEVTLQPVDI
LGVDAAIMFS DILVVPLEMG MELKFIKGEG PVFENPILSM DSLDKLSVEK AVKNLSYVYD
TIKLTREKLS SDKALIGFCG APWTIATYMI EGGSTKTYNI SKKMLYDNPQ FLHAILRKVT
NALKLYLEEQ IKAGVNAVQI FDSWASALEQ NAYLEFGFSY INELVDYIKS QYPDIPVIVF
PKGISGFLNK IGGKFDVFGV DWSTPLKMAK ETLGSRYVLQ GNMEPTRLYS KDAIDDGVDE
ILSIMRGHRH IFNLGHGILP DVPVENAKYF IKSVQEKSAK YCK
|
|---|
| |