| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CFF8240_1377 |
|---|
| Symbol | miaB |
|---|
| ID | 4538848 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter fetus subsp. fetus 82-40 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008599 |
|---|
| Strand | - |
|---|
| Start bp | 1356169 |
|---|
| End bp | 1357473 |
|---|
| Gene Length | 1305 bp |
|---|
| Protein Length | 434 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 639746740 |
|---|
| Product | (dimethylallyl)adenosine tRNA methylthiotransferase |
|---|
| Protein accession | YP_892518 |
|---|
| Protein GI | 118474317 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0621] 2-methylthioadenine synthetase |
|---|
| TIGRFAM ID | [TIGR00089] RNA modification enzyme, MiaB family
[TIGR01574] tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.569645 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGAGTGTCA AAAAGAAACT GTTTATAGAG ACTTTAGGTT GCGCGATGAA TGTTCGCGAT
AGTGAGCATA TCATTGCCGA ACTAAGTCAA AAAGAAAATT ACGAAGTTAC TAATATTATT
GAGGATGCTG ATCTCATACT CATAAATACC TGCTCAGTTA GAGAAAAACC GGTTCATAAG
CTTTTTAGCG AGGTCGGAAC ATACGAAAAA GCTAAGAAAA AAGGGGCAAA GATAGGAGTT
TGCGGTTGCA CTGCAAGTCA CCTTGGAAGT GAAGTTTTTA AGCGCGCTCC ATATGTAGAT
TTCGTTCTTG GCGCTAGAAA TATATCTAAA ATAACAACAG CGCTTAATAC TCCAAAATTC
GTAAGCGTAG ATATAAATCA CGATGAGAGC GAGTATGCTT TTGGAGATTT TCGCTCAAGT
CCTTATAAGA GCTTTGTAAA TATTATGATA GGTTGTGATA AAAAATGTAC TTATTGCATT
GTTCCACAAA CCAGAGGCGA TGAGATAAGC ATTCCAAAAG ATATTATTTT AAAAGAGGTG
AGAAAAGCAG CTTCTTCTGG CGCAAAAGAG ATATTTTTGC TTGGTCAAAA TGTAAATAAT
TACGGTAAAA GATTTTCAGG AACTCATGAA AAGATAGATT TTAGCGACCT TTTAAATTTA
ATAAGCGAAG TTGATGGCGT AGAGAGAATT CGTTTTACCA GTCCTCATCC GCTGCACATG
GATGATAAGT TTTTAAAAGA ATTTAGCACA AATCCTAAAA TTTGTAAATC CATGCATATG
CCTTTGCAAA GCGGTTCAAA TGAGATTTTA AAAGCTATGA AAAGAGGATA CACGAAAGAG
TGGTTTTTGG ATCGCGCTTT AAAATTAAGA GAGATTTGCT CCGATGTTAC TATTTCTACA
GATATCATAG TAGCGTTTCC AGGTGAAAGC GATAGGGATT TTGCCGATAC TATGAGTGTT
GTAGAAAGCA TCAAATTTGA ACAGATGTTT TCATTTAAAT ACTCATCTCG TCCGCTAACT
CCTGCTGCAA GTATGACGAA TCAAGTAAAT AGCGATATAG CAAGTAGGCG CTTAAGTACG
CTTCAAGCTA GGCATACTGA AATTTTAGAT GAGATTGTAA AAGCTCAAAA AAACTCTATT
CATGAGGTAT ATTTTGAAGA ACTTAGAGCA AACAGTAGCG TAGCAGGGCG TACATTTAAC
AACTTTTTGG TGCAAACTAA TGGCAGCGAA GAGTTACTTG GAAAGATACT AAAAGTAAAA
ATTACGGATC CAAAAAGAAT GGTTTTATAT GGTCAAATCA TTTAA
|
|---|
| Protein sequence | MSVKKKLFIE TLGCAMNVRD SEHIIAELSQ KENYEVTNII EDADLILINT CSVREKPVHK
LFSEVGTYEK AKKKGAKIGV CGCTASHLGS EVFKRAPYVD FVLGARNISK ITTALNTPKF
VSVDINHDES EYAFGDFRSS PYKSFVNIMI GCDKKCTYCI VPQTRGDEIS IPKDIILKEV
RKAASSGAKE IFLLGQNVNN YGKRFSGTHE KIDFSDLLNL ISEVDGVERI RFTSPHPLHM
DDKFLKEFST NPKICKSMHM PLQSGSNEIL KAMKRGYTKE WFLDRALKLR EICSDVTIST
DIIVAFPGES DRDFADTMSV VESIKFEQMF SFKYSSRPLT PAASMTNQVN SDIASRRLST
LQARHTEILD EIVKAQKNSI HEVYFEELRA NSSVAGRTFN NFLVQTNGSE ELLGKILKVK
ITDPKRMVLY GQII
|
|---|
| |