Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CFF8240_1330 |
Symbol | sodC |
ID | 4538438 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter fetus subsp. fetus 82-40 |
Kingdom | Bacteria |
Replicon accession | NC_008599 |
Strand | - |
Start bp | 1316041 |
End bp | 1316601 |
Gene Length | 561 bp |
Protein Length | 186 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 639746697 |
Product | copper/zinc superoxide dismutase |
Protein accession | YP_892477 |
Protein GI | 118475559 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG2032] Cu/Zn superoxide dismutase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.236149 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTAAAA TAAGTTTTAT TAGCGCATTG CTAGCTACTG CTTTATTTGG AGCAACTCAT GGCGAACAAA GTTCTCCATT AAATAGCTTT GATCCAAAAT CCGTAGATCA TATCGTTATC AAAATGAGTG CTCTTAGCGC AAATGGAGAT AAAAGCGTAG GCGAAGTCGT AGCTATAAAT ACAGCAGATG GCGTTGCATT TTTTCCTAGA CTTTCTGGAT TATCTGCACC AGGTATGCAT GGATTTCATG TTCATACAAA CCCAGATTGC GGATCTAGTG ATAAAGGACT TGGTATGAAA GCTGGTGGTC ACTGGGATCC TCAAAATACC GGTAAACACT CATTTTCTTG GGATAATGAT GGTCATAAAG GAGATCTTCC CGCCTTATAT GTAGATACAA ATGGAGATGC AAATTATCCG GTTTTATCAA CAAAAATTAA AAATATAAAT GAGCTAAAAG GACACTCTTT AATGGTTCAT TTAGGTGCGG ATAATCATAG TGATAGCCCA AAACCTTTAG GTGGAGGCGG TGCTAGACTT GTTTGCGGAG TTATAAATTA A
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Protein sequence | MSKISFISAL LATALFGATH GEQSSPLNSF DPKSVDHIVI KMSALSANGD KSVGEVVAIN TADGVAFFPR LSGLSAPGMH GFHVHTNPDC GSSDKGLGMK AGGHWDPQNT GKHSFSWDND GHKGDLPALY VDTNGDANYP VLSTKIKNIN ELKGHSLMVH LGADNHSDSP KPLGGGGARL VCGVIN
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