| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CFF8240_1316 |
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| Symbol | rpoB |
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| ID | 4538217 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Campylobacter fetus subsp. fetus 82-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008599 |
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| Strand | - |
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| Start bp | 1306567 |
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| End bp | 1310706 |
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| Gene Length | 4140 bp |
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| Protein Length | 1379 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 639746683 |
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| Product | DNA-directed RNA polymerase subunit beta |
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| Protein accession | YP_892468 |
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| Protein GI | 118475419 |
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| COG category | [K] Transcription |
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| COG ID | [COG0085] DNA-directed RNA polymerase, beta subunit/140 kD subunit |
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| TIGRFAM ID | [TIGR02013] DNA-directed RNA polymerase, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0378497 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTAAATA GCCTATATTC TGGAAATCGT CTCAGAGTTG ATTTTTCAAA TGTTGCAAAA
GAGATTGATG TTCCAAATTT ATTACAATTG CAAAAAAAGA GTTTTGATCA TTTTTTAAAT
CTTGATAATT CACAAACCGA AAGCGGAATT GAAAAAGTAT TTAAGTCGAT ATTCCCAATA
CATGATCCTC AAAATAGACT TACATTAGAG TATGTCAGCA GCGAAATAAG TAAGCCAAGA
TATACAGTTA GAGAGTGTAT GGAAAGAGGA CTTACGTATT GCGTAAATTT AAAAATTAAA
ATTAGACTGA TTGTACATGA CAGAGATGAA AAAACAAGTG AAAAAGTCGG TGTCAAAGAT
ATAAAAGAAC AAGAAATTTT TGTACGTGAA ATTCCTCTTA TGACTGATAG AATTTCATTT
ATAATAAACG GCGTAGAAAG AGTCGTAGTA AATCAGCTTC ATAGAAGCCC AGGTGTTATA
TTTAAAGAAG AAGAGAGTCC AACTGTAGTA AATAAACTAA TATATACAGC GCAAATTATA
CCAGATCGCG GTAGCTGGCT CTATTTCGAA TATGACACAA AAGATGTTTT ATATGTGCGT
ATAAATAAAA GAAGAAAAGT TCCTATAACG ATTCTTTTTA GAGCGCTTGG ATATAAAAAA
CAAGATATAG TAAAGTTATT TTACCCTATC CAAACATTAA ATATAAAAAA TAATAAATTT
TTAACCATGT TTAATCCGGA TGATTTTTCT GGAAGAGTTG ATTATGATAT AAAAGATGAA
GATGGAAATA TTTTACATCA AGCAGGAAAG AGACTTACAA AGAAAAAAGC AGATAAGCTT
ATTGAAGATG GACTCAAATT TGTAGAGTAC CCGATAGAAG TTTTGGTAAA TAGATATTTG
GCTAGTCCAG TTATCGATAA AGAGAGCGGC GAAGTTATTT ATGATACTTT AACTCAGCTA
GATGAAAATA AATTAGCAAA AATAGTAGCT GAACAAAATA GTATAGAAAT AGCAAATGAT
CTTGCAAGCG GTGTTGATGA TGCTATTATT AACTCATTTT TACAAGATTA TGAAACGCTA
AAATTACTTA AGCAAACTGA AGGCTTAGAA GATGAAAATG ACCTGGCTGC TATTAGAATT
TATAAAGTTA TGCGCCCAGG AGAGCCTGTA GTTAAAGAAG CTGCAAGAAC GTTTGTAAAT
GATCTATTTT TTAACCCAGA AAGATATGAT CTTACAAAAG TAGGTCGTAT GAAAATGAAT
CATAAATTAG GTCTTAGCGT TCCTGAGTAT GTTACTGTAC TTACAAATGA AGATATTATA
AAAACTGCTA AATATCTGAT AAAAGTAAAA AACGGACAAG GTTATATAGA TGATAGAGAT
CACTTAGGTA ACCGTCGTAT CAGATCAATA GGCGAGCTTT TAGCAAATGA GCTTCATTTG
GGATTTGTGA AAATGCAAAA AGCTATTAGA GATAAATTTA CAAGTCTTAG TAATAACGTA
GATGAGCTTA TGCCTTATGA TCTAGTAAAT CCTAAAATGA TAACTACGAC TATTATGGAA
TTTTTTACAG GCGGTCAGCT CAGCCAATTT ATGGATCAAA CAAATCCTCT TAGCGAAGTT
ACGCATAAAC GTCGTTTGTC GGCTCTTGGC GAAGGCGGTT TAGTAAAAGA GCGTGCCGGA
TTTGAAGTAC GTGACGTGCA TCCGACTCAT TATGGTAGAA TTTGCCCTGT TGAGACTCCA
GAAGGTCAAA ATATCGGTCT TATCAACACT CTTTCTACAT ATGCAAAAGT AAATGATCTA
GGATTTGTTG AATCACCTTA TAGAAGAGTA ATAGACGGTA AAGTCACAAA TGAGATTGTT
TATTTAACAG CTACTCAAGA AGAGGGTCAT ATTATAGCTC CAGCTTCAAC TGTATTAGAT
GCAAACGATA TTATAAAAGA AGATCTTATA GAAGTAAGGC GAGATGGAGA AATGCTTCTT
GCAAAAAGAG AAGACGTAAC ATTGATAGAT CTTTGTAGTG GTATGGTTAT GGGCGTTGCC
GCTTCTTTGA TACCGTTTTT AGAGCATGAT GATGCAAACC GTGCACTTAT GGGTTCAAAC
ATGCAGCGTC AAGCAGTTCC TCTTCTTAGA TCTACAGCAC CTATAGTAGG AACCGGTATG
GAAGCTATAG TTGCAAGAGA CGCGTGGGAG GCTATAAAAG CTAAACGTGG TGGCGTTATA
GAAAAAGTTG ATAATAGAAA CATATTTATT CTTGGTGAAG ATGAAAACGG TCCATATATT
GATCAATATA CTATGGAAAA AAATTTAAGA ACTAACCAAA ATACAACTTT TAGCCAACAT
CCTATAGTTA AAAAAGGCGA TATGGTAAAA TCAGGACAGA TAATAGCTGA TGGCTCGAGT
ATGGAAAAGG GCGAGTTAGC CATAGGTAAA AATGCTCTTA TAGCATTTAT GCCTTGGAAT
GGTTATAACT ATGAAGATGC TATTGTTATG AGTGAGAGAA TGATACGCGC AGACGCATTT
ACTAGCGTTC ATATATATGA AAAAGAGATA GAAGCAAGAG AGCTAAAAGA CGGTGTAGAA
GAGATAACTA GAGATATTCC AAATATGAAA GAAGAAGATC TTATGCACCT AGATGAGAGC
GGTATAGTAA AAATAGGCAC TCATATCAAA CCAGGAATGA TTTTGGTGGG TAAAGTTTCA
CCAAAAGGAG AGGTAAAGCC GACTCCCGAA GAGAGACTTC TTAGAGCAAT ATTTGGTGAA
AAAGCAGGTC ACGTTGTAAA TAAATCTTTG TATGCCGGAG CTAGTCTTGA AGGTGTGGTT
ATAGATGTTA AGATATTTAC AAAAAAAGGC TATGAAAAAG ACGCTAGATC ATTTAAAGCA
TATGAGGATG AAAAGAATAT TTTAGAAAAA GAACATCATG ACAGACTTTT AATGCTTGAT
CGTGAAGAGA TGTTAAGAGT TACTGCTTTA TTATCTAAAA ATCCTCTTGA GAGTGAGCTA
GAGATCGGTA AAAATAGCTA TAAAAAAGGT GATAAGATAA AAAGATCAGA TCTTGATAAT
GTAAATAGAT TTACTCTTAA CACCTATGTA AAGTGCTTTT CAAAAGAAAT TCAAAAAACA
TATGAAGATA TGAAAGCTTA TTTTCAAAAT GAGAAGAAGA AATTAAAAGA CGAGCATGAC
GCTAAACTTG AAATTTTAGA AAAAGATGAT ATATTGCCAA GCGGTGTAGT TAAGTTAGTT
AAAGTATATT TAGCTACAAA AAGAAAATTA AAAGTAGGCG ATAAGATGGC AGGACGTCAT
GGCAATAAAG GTATTGTATC AAATATAGTT CCGGATGTTG ATATGCCGTA TCTTCCAAAT
GGACGTACGG TAGATATAGT TTTAAATCCA TTAGGCGTTC CAAGTCGTAT GAATATAGGT
CAAATTTTAG AAAGCCACCT AGGTTTAGTT GGTATGAAAT TAGGAGAGCA GATTGAAGAA
ATCTTTGAAA ATAAAAAAGC CGAATGGATA AAAGAGCTAA GAGCAAAAAT GACTGAGATA
GCAGATGTAT CTCGTCTTAT GGATGCTAAA GCTATTTTAA GCAAAATTGA TGATGATAAG
CTCATAGATT ATGCTAGGGA CTGGGCTAGC GGGGTTAGAT TTGCTACTCC TATTTTTGAA
GGTGTTAAAG CTGATGAATT TAAAAAGTTA TTTGAGATGG CAAAAATAGA TATGGATGGT
AAAACCGAAC TTTATGACGG ACGTACCGGA TCAAAGATGG CTGAGCGTGT TAATGTTGGA
TGTATGTATA TGTTAAAACT TCACCACTTA GTTGATGAAA AAGTTCATGC AAGAAGTACC
GGACCATACT CTTTAGTAAC ACAACAACCA GTTGGTGGTA AAGCTCTAAG CGGTGGTCAA
AGATTTGGAG AAATGGAAGT TTGGGCACTT GAGGCTTATG GCGCGGCTCA TACTTTAAGA
GAAATGCTGA CTGTAAAATC TGATGACGTA GAGGGTCGTT TAGCTGCTTA TAAAGCACTT
ACTAGAGGAG AAAATGTACC AAGTACTGGT ATTCCAGAAA CGTTTTTTGT TTTAACAAAT
GAGCTAAAAT CTCTAGCACT TGATGTTGAG ATCTATGATG AGGAAGAGAA TAATGAGTGA
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| Protein sequence | MLNSLYSGNR LRVDFSNVAK EIDVPNLLQL QKKSFDHFLN LDNSQTESGI EKVFKSIFPI
HDPQNRLTLE YVSSEISKPR YTVRECMERG LTYCVNLKIK IRLIVHDRDE KTSEKVGVKD
IKEQEIFVRE IPLMTDRISF IINGVERVVV NQLHRSPGVI FKEEESPTVV NKLIYTAQII
PDRGSWLYFE YDTKDVLYVR INKRRKVPIT ILFRALGYKK QDIVKLFYPI QTLNIKNNKF
LTMFNPDDFS GRVDYDIKDE DGNILHQAGK RLTKKKADKL IEDGLKFVEY PIEVLVNRYL
ASPVIDKESG EVIYDTLTQL DENKLAKIVA EQNSIEIAND LASGVDDAII NSFLQDYETL
KLLKQTEGLE DENDLAAIRI YKVMRPGEPV VKEAARTFVN DLFFNPERYD LTKVGRMKMN
HKLGLSVPEY VTVLTNEDII KTAKYLIKVK NGQGYIDDRD HLGNRRIRSI GELLANELHL
GFVKMQKAIR DKFTSLSNNV DELMPYDLVN PKMITTTIME FFTGGQLSQF MDQTNPLSEV
THKRRLSALG EGGLVKERAG FEVRDVHPTH YGRICPVETP EGQNIGLINT LSTYAKVNDL
GFVESPYRRV IDGKVTNEIV YLTATQEEGH IIAPASTVLD ANDIIKEDLI EVRRDGEMLL
AKREDVTLID LCSGMVMGVA ASLIPFLEHD DANRALMGSN MQRQAVPLLR STAPIVGTGM
EAIVARDAWE AIKAKRGGVI EKVDNRNIFI LGEDENGPYI DQYTMEKNLR TNQNTTFSQH
PIVKKGDMVK SGQIIADGSS MEKGELAIGK NALIAFMPWN GYNYEDAIVM SERMIRADAF
TSVHIYEKEI EARELKDGVE EITRDIPNMK EEDLMHLDES GIVKIGTHIK PGMILVGKVS
PKGEVKPTPE ERLLRAIFGE KAGHVVNKSL YAGASLEGVV IDVKIFTKKG YEKDARSFKA
YEDEKNILEK EHHDRLLMLD REEMLRVTAL LSKNPLESEL EIGKNSYKKG DKIKRSDLDN
VNRFTLNTYV KCFSKEIQKT YEDMKAYFQN EKKKLKDEHD AKLEILEKDD ILPSGVVKLV
KVYLATKRKL KVGDKMAGRH GNKGIVSNIV PDVDMPYLPN GRTVDIVLNP LGVPSRMNIG
QILESHLGLV GMKLGEQIEE IFENKKAEWI KELRAKMTEI ADVSRLMDAK AILSKIDDDK
LIDYARDWAS GVRFATPIFE GVKADEFKKL FEMAKIDMDG KTELYDGRTG SKMAERVNVG
CMYMLKLHHL VDEKVHARST GPYSLVTQQP VGGKALSGGQ RFGEMEVWAL EAYGAAHTLR
EMLTVKSDDV EGRLAAYKAL TRGENVPSTG IPETFFVLTN ELKSLALDVE IYDEEENNE
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