| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CFF8240_1257 |
|---|
| Symbol | |
|---|
| ID | 4538697 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter fetus subsp. fetus 82-40 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008599 |
|---|
| Strand | - |
|---|
| Start bp | 1246332 |
|---|
| End bp | 1248518 |
|---|
| Gene Length | 2187 bp |
|---|
| Protein Length | 728 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 639746626 |
|---|
| Product | polynucleotide phosphorylase/polyadenylase |
|---|
| Protein accession | YP_892413 |
|---|
| Protein GI | 118474584 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG1185] Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) |
|---|
| TIGRFAM ID | [TIGR03591] polyribonucleotide nucleotidyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAGTGTT CAATAGAAGT AAATAATCAA ATTGAAATTT TTGATCTTAA TAAGGTTGCC
AAACAAGCAG CCGGCGCAGT GTTAATGCGT GTAAAAAATA CAGTTGTATT AGCCGCGGTT
GCTAGAGAAG ATGCTCAAGT AGAAGAGGAT TTTTTACCTC TTACCGTGCA GTATATAGAA
AAACAATACG CCGCTGGTAG AATACCAGGA GGATATGTCA AAAGAGAGAC TAAACCAGGA
GATTTTGAGA CATTAACAAG CCGTATTATA GATAGAAGTT TAAGACCTTT ATTCCCTAAA
GGCTATGCAT ATCCGACTCA GATTGTCGTA ATGGTTTTAA GTAGCGATCC AGAAGTGGAT
TTGCAAGTAG TGTCGCTAAA TGCTGCGAGT GTAGCTTTAT ATCTTAGTGA TATTCCGGTT
AACAGTCCGG TTTGCGGTGT TAGGGTAGGG CATATAAACG GTAAATTTGT TATAAATCCA
AGCAATTCAG AGCTAAAAAA CTCTGCTCTT GATCTTTACG TGGCAGGCGT AAAAGATGAA
CTTCTTATGA TAGAAATGAG AAGTTTACCC AATGAACAAA ATGAAATTGT ACCAGTCATC
GCTATAGATC CTATGATGGA TCCTAGTTTA AATGAAGGTT TCGTTTCAAG ACAAAAAATG
AATGAATTTA GTGAAGATCT TATGATAGAT GCTATAAAAT TAGCTACAGA AGCTATATTA
AAAGGAAGCA ACGCATATGA AGAGGCGTTT CGTAACTACA AAAAAGAGAC TGCAAATTTA
GAGTACAAGC CAGAGATAGA AAATGAAAAT GTTGCGATAT ATATAAATGA ATTTTACAAA
GAAGATGTAA AAGCGGCTAT AAATCAAATG GCTAAAAGCG AAAGAGCGAG TGAGCTTTCT
AAAATAGCTA AACAAATAGC TCTTAGTGAA GTTGCTCAAA AAGAGGGCTG GGATGAAGCT
CTTATCTCGA ATATACTTGG AAAATATAAG AAAAAGTTAG TTAGAACAGG TATTATAAAA
GATAAAAAAA GAGCCGACGG AAGAGGTCTA AAAGATGTTA GGCCGATCAG TATAGAGACG
AATATTTTGC CAAATGCACA TGGAAGTTGT CTATTTACCC GCGGTCAAAC TCAAGCTCTT
GTTGTAACTA CTTTAGGTAC CGATAATGAT GCTCAAATGA GTGAGTACTT GACAGAAAAA
AATGCAGTTG CCGATAAATT TATGTTTAAT TATAATTTTC CTGGATTTAG CGTAGGTGAG
GCAAGTCCTT TAAAGGCTCC TGGACGACGC GAGTTAGGAC ATGGAAATTT AGCAAAAAGA
GCTCTTTATC CAAGTATAGA TTTAAATAGT CCGTACTCGT TAAGAGTTGT TAGCGAAATT
TTAGAAAGTA ACGGTTCAAG TTCTATGGCT AGTGTATGTG GCGGCTCTTT GTCACTTAGA
GCAGCAGGAG TCGAAACGAT CAAGCTTGTA GCCGGAGTAG CGATGGGGCT TGTATTTGAA
GGTGATGAGC ACGCTGTTTT AACAGATATA ATGGGGCTTG AAGACCACGA TGGAGATATG
GACTTCAAGG TCGCAGGCTC AAAAGACGGC ATCACCGCTC TTCAGATGGA TATCAAATTA
GGCGGAATTA GTTTAGATGT ATTAAAAGAA GCGCTATACC AAGCAAAAGA AGCTAGAGAT
CATATTTTAA ATTTAATGGT TAAAGCAGAT GAAGAAATAG TCGTGAATGA GGATGTTTTA
CCAAAGTTAG AGTTATTTAG CGTAGATCCT AGTAAAATAG TTGATATAAT AGGACAGGCC
GGAAAAACCA TAAAAGAGAT TATAGAAAAA TTTGAAGTTA GCATAGATCT TGACAGAGAT
AAAGGCGAAG TAAAGATAGC CGGGGGAGAG AGACAAAAGG TAGAAGCTGC TAAAGATTAT
ATTATACAAA TTACGCAAAA AGAGCAGAGA AGCGGCGGTT TTAGGAACAA AAGAGAGTAT
AAAAACGTAA CTCCTTTTAA CATAGGTGAT GAGTTTGAAG GCGAAATTAA AAAAATGGCT
GCTTTTGGTG CATTTATATC TTTAAGAGAT GGAGTTGACG GGCTTTTACA TATTTCAAAA
ATAGTTTCAC CTTTAAAAGA GGGTGATACG ATAAAGGTAA AAGTTTCAGA TATTAAAGGC
GGAAAAATAT CATTGGATCT TAATTAA
|
|---|
| Protein sequence | MQCSIEVNNQ IEIFDLNKVA KQAAGAVLMR VKNTVVLAAV AREDAQVEED FLPLTVQYIE
KQYAAGRIPG GYVKRETKPG DFETLTSRII DRSLRPLFPK GYAYPTQIVV MVLSSDPEVD
LQVVSLNAAS VALYLSDIPV NSPVCGVRVG HINGKFVINP SNSELKNSAL DLYVAGVKDE
LLMIEMRSLP NEQNEIVPVI AIDPMMDPSL NEGFVSRQKM NEFSEDLMID AIKLATEAIL
KGSNAYEEAF RNYKKETANL EYKPEIENEN VAIYINEFYK EDVKAAINQM AKSERASELS
KIAKQIALSE VAQKEGWDEA LISNILGKYK KKLVRTGIIK DKKRADGRGL KDVRPISIET
NILPNAHGSC LFTRGQTQAL VVTTLGTDND AQMSEYLTEK NAVADKFMFN YNFPGFSVGE
ASPLKAPGRR ELGHGNLAKR ALYPSIDLNS PYSLRVVSEI LESNGSSSMA SVCGGSLSLR
AAGVETIKLV AGVAMGLVFE GDEHAVLTDI MGLEDHDGDM DFKVAGSKDG ITALQMDIKL
GGISLDVLKE ALYQAKEARD HILNLMVKAD EEIVVNEDVL PKLELFSVDP SKIVDIIGQA
GKTIKEIIEK FEVSIDLDRD KGEVKIAGGE RQKVEAAKDY IIQITQKEQR SGGFRNKREY
KNVTPFNIGD EFEGEIKKMA AFGAFISLRD GVDGLLHISK IVSPLKEGDT IKVKVSDIKG
GKISLDLN
|
|---|
| |