Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CFF8240_1230 |
Symbol | |
ID | 4538764 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter fetus subsp. fetus 82-40 |
Kingdom | Bacteria |
Replicon accession | NC_008599 |
Strand | + |
Start bp | 1213699 |
End bp | 1214418 |
Gene Length | 720 bp |
Protein Length | 239 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 639746600 |
Product | His/Glu/Gln/Arg/opine amino acid ABC transporter permease |
Protein accession | YP_892387 |
Protein GI | 118474738 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0765] ABC-type amino acid transport system, permease component |
TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
Num covering plasmid clones | 81 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGACAAATT TATATAATGA AAAATTTTTA AAGTTTATAT TTTCCATAGC TATTATAATT ATAGGAATTT ACTATACTTA CCCAGTTAGC ATAACAGATG CCCAAAAAGG CGCTTACGTA GATTCATATT TTACGACGTT AGGACTTACA TTCGGCGGTA TTTTTATAGG TATCGTACTT GGTTTCATAT TAGCTTTTTT AAAGTTTTTA AATATCAAAA TTCTATCATT TATCATAGAC GAATACATAG ATATAGTAAG AGGAACTCCG GTACTTTTGC AACTCATGAT ATTTGCCTTT GTCATACTTG CTACTCTTAG CGATAACTTT TACGCCGCGG TAATAGCTCT TGGACTAAAC AGTTCTGCAT ACGTAGCCGA AATCGTAAGA AGCGGTATAA ACAGCGTAGA TAAGGGTCAA ATGGAAGCAG CTCGCGCTAT GGGACTTAGC TACAGCGTTT CTATGCGCCA AATCATCTTT CCTCAAGCCG TTAAAAACAT ACTTCCGGCT CTTGCAAACG AGTTTATAAG CCTATTTAAA GAGACTTCGG TCGTCGGACT TATAGGTATA TTTGATCTTA CTATGCAAAG TAAAAGCTTG CAAGCAACTC TATTTAGTCC CGAGCCTATC TTGTTTGCGG GAGTTATATA CTACGCAAAT GTTAAATTCT TTTCGCTTCT TGCAAAACTC TTAGAAAATA GGCTAAACAA AAATGATTAA
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Protein sequence | MTNLYNEKFL KFIFSIAIII IGIYYTYPVS ITDAQKGAYV DSYFTTLGLT FGGIFIGIVL GFILAFLKFL NIKILSFIID EYIDIVRGTP VLLQLMIFAF VILATLSDNF YAAVIALGLN SSAYVAEIVR SGINSVDKGQ MEAARAMGLS YSVSMRQIIF PQAVKNILPA LANEFISLFK ETSVVGLIGI FDLTMQSKSL QATLFSPEPI LFAGVIYYAN VKFFSLLAKL LENRLNKND
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