Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CFF8240_1171 |
Symbol | rpiB |
ID | 4538964 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter fetus subsp. fetus 82-40 |
Kingdom | Bacteria |
Replicon accession | NC_008599 |
Strand | - |
Start bp | 1157620 |
End bp | 1158066 |
Gene Length | 447 bp |
Protein Length | 148 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 639746541 |
Product | ribose 5-phosphate isomerase B |
Protein accession | YP_892329 |
Protein GI | 118475668 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0698] Ribose 5-phosphate isomerase RpiB |
TIGRFAM ID | [TIGR00689] sugar-phosphate isomerases, RpiB/LacA/LacB family [TIGR01120] ribose 5-phosphate isomerase B |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.0563702 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAGTTG CTCAGATTTT TATAGCAAGT GATCACGCTG GATTTGATAC TAAGGAGTTT GTAAAAAGTT ATTTATCAAA TTTCGAGTTT GATGTGGTTG ATCTTGGAGC ATATTCTAAA GATATGAGCG TAGATTATCC TGATTTTGCC GATAAAATGG CTGAAAATAT AAATAACGAT TTTAAATTTG GTATTTTAAT ATGCGGAACA GGAATAGGCA TATCCATAGC CGCAAATCGC CATCCTCATA TAAGATGCGC TCTTTGCCAT GATGCTACTA CTGCAAAATT AGCTCGTGAG CATAATGATG CAAATGTACT TTGCTTTGGC GGCAGAATAG TCGGAACTAG TATCATTCAA GATATGGTAA AAGTATTTTT TACTACTGAG TTTGCCGGTG GTAGACATGA AAAAAGAGTT TATAAATTAG GAAACTACAA ATGCTAG
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Protein sequence | MKVAQIFIAS DHAGFDTKEF VKSYLSNFEF DVVDLGAYSK DMSVDYPDFA DKMAENINND FKFGILICGT GIGISIAANR HPHIRCALCH DATTAKLARE HNDANVLCFG GRIVGTSIIQ DMVKVFFTTE FAGGRHEKRV YKLGNYKC
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