Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CFF8240_1141 |
Symbol | glyA |
ID | 4538194 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter fetus subsp. fetus 82-40 |
Kingdom | Bacteria |
Replicon accession | NC_008599 |
Strand | - |
Start bp | 1131763 |
End bp | 1133007 |
Gene Length | 1245 bp |
Protein Length | 414 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 639746511 |
Product | serine hydroxymethyltransferase |
Protein accession | YP_892299 |
Protein GI | 118475761 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0112] Glycine/serine hydroxymethyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.217478 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTTTGG AAAGTTTTGA TAAGGATATT TACTCTTTAG TAAATAAAGA GTTAGAAAGA CAGTGCGATC ATTTAGAGAT GATAGCTAGC GAAAATTTTA CATATCCTGA TGTTATGGAA GTTATGGGCT CGGTACTCAC AAATAAATAT GCTGAGGGAT ACCCTAGCAA AAGATATTAT GGTGGTTGTG AGTTTGTAGA TGAGATAGAA CAAATAGCAA TTGATAGATG TAAAAAGCTT TTTGGTTGCG AGTTTGCAAA CGTTCAGCCA AATAGCGGAA GTCAGGCAAA TCAAGGCGTT TATGGAGCGT TTTTGAAACC TGGTGATAAA ATACTTGGTA TGGATCTAAG CCATGGTGGA CACCTTACTC ACGGTTCTAA AGTTTCAAGC TCTGGAAAAA ACTATGAGAG CTTTTTCTAC GGTGTTGAGC TTGATGGACG TATAAATTAT AATAAAGTAG AAGAGATAGC AAATATAACT AAACCTAAAA TGATAGTTTG CGGTGCTAGT GCTTATGCTA GAGAGATTGA TTTTAAGAAA TTTAGAGAGA TAGCCGATAG CGTTGGAGCA TATTTATTTG CCGATGTTGC TCATATAGCA GGTCTTGTAG TAGCAGGAGA ACATAACAAT CCATTTCCTC ACTGTCACGT TGTAAGTTCA ACTACTCATA AAACATTAAG AGGTCCAAGA GGCGGTATCA TCATGACAAA TGATGAGGAA TTTGCTAAAA AAATAAATAG TTCTATATTT CCGGGAATTC AAGGCGGGCC GCTTATGCAC GTGATTGCTG GAAAAGCAGT TGGATTTAAG CATAATCTTA GTGACGAGTG GAAAGTTTAT GCTAAGCAAG TAAAGACAAA CGCTAAAAAA CTCGGAGAAG TCTTAATAAA CAGAGGGTAT GATCTAGTAA GCGGCGGAAC AGACAATCAC CTTGTTCTAG TAAGTTTTTT AAATAAAGAA TTTAGTGGAA AAGATGCAGA TATCGCTTTA GGTAACGCAG GAATAACAGT AAATAAAAAT ACGGTTCCGG GCGAAACTAG AAGTCCGTTT ATAACAAGTG GTATAAGAGT AGGTAGCCCG GCACTTACTG CAAGAGGCAT GAAAGAGAGT GAATTTGAGC TTATAGCAAA CCGTATAGCA GATGTTTTAG ATGATATAGA TAATTCTTCA AAACAAGAGA AGATAAAAGC AGAACTAAAA GAGCTTGCTC ACCAGTTTAT TATTTATGAC AAGGCGATGT TCTAA
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Protein sequence | MSLESFDKDI YSLVNKELER QCDHLEMIAS ENFTYPDVME VMGSVLTNKY AEGYPSKRYY GGCEFVDEIE QIAIDRCKKL FGCEFANVQP NSGSQANQGV YGAFLKPGDK ILGMDLSHGG HLTHGSKVSS SGKNYESFFY GVELDGRINY NKVEEIANIT KPKMIVCGAS AYAREIDFKK FREIADSVGA YLFADVAHIA GLVVAGEHNN PFPHCHVVSS TTHKTLRGPR GGIIMTNDEE FAKKINSSIF PGIQGGPLMH VIAGKAVGFK HNLSDEWKVY AKQVKTNAKK LGEVLINRGY DLVSGGTDNH LVLVSFLNKE FSGKDADIAL GNAGITVNKN TVPGETRSPF ITSGIRVGSP ALTARGMKES EFELIANRIA DVLDDIDNSS KQEKIKAELK ELAHQFIIYD KAMF
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