| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CFF8240_1138 |
|---|
| Symbol | aroE |
|---|
| ID | 4538434 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter fetus subsp. fetus 82-40 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008599 |
|---|
| Strand | - |
|---|
| Start bp | 1129658 |
|---|
| End bp | 1130443 |
|---|
| Gene Length | 786 bp |
|---|
| Protein Length | 261 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 33% |
|---|
| IMG OID | 639746508 |
|---|
| Product | shikimate 5-dehydrogenase |
|---|
| Protein accession | YP_892296 |
|---|
| Protein GI | 118475038 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0169] Shikimate 5-dehydrogenase |
|---|
| TIGRFAM ID | [TIGR00507] shikimate 5-dehydrogenase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAAGTATT TTGCTGTTTT TGGAAATCCT ATAAATCATT CTATATCTCC ACGCCTACAT
AACCTTGCTT TACAAGGTTA TGGGCTGGCT GGATTTTATG GCAGAGTTCA TTTAGAAGAT
GGACTTGAGT TAATAAATAC ATTTAATAAA CTTGAATTGA GTGGAGCAAA TGTCACGGTT
CCATTTAAAG AGATTGTTCT AAATCAGTGT GACGAAATAG ATGAAACTGC TAAAAGTATA
GGTTCGTTAA ATACGCTTGT AAAAAGAAAC GGTAAAATAT TTGGATATAA TACGGATGCA
CCCGGATTTA TGCTTGCTAT AAGTGAGTTT AAAGATATCG AAAGTGCGTT GATTTTGGGG
GCTGGCGGAA CGGCTAGAGC TATTTGTTAT ATTCTTCAAA AAAACGGTAT AGATGTAGAA
ATATTAAATA GAAGCAGCAG CAGAGCACAG AGTTTCAAAG ATTGCAGTTT TTTTACACAT
CAAGACTATA AGCCTAAAGG CTACACTTTA GTTGTTAATA CAACTTCCGC GGGACTTGCG
GACGACCATT TGCCGGCTAA TAGAGATATT TTAAAACAAG TGTTAGATAG TTCTAAATTT
GCATTTGATG TTATTTATAA TAAAAATACT CCTTTTTTAA ATTTAGCAAA GTCGTGTTCT
CTCACTTGCA AAGATGGAAA AGATATGCTG CTTTTTCAGG CTATCTTATC GTTTAATATT
TTTTATGAAA ATAAATTTGA AAATGAAAAA ATTAGATCTT TTATGCAAGA AGCTTTGTTT
TTCTAA
|
|---|
| Protein sequence | MKYFAVFGNP INHSISPRLH NLALQGYGLA GFYGRVHLED GLELINTFNK LELSGANVTV
PFKEIVLNQC DEIDETAKSI GSLNTLVKRN GKIFGYNTDA PGFMLAISEF KDIESALILG
AGGTARAICY ILQKNGIDVE ILNRSSSRAQ SFKDCSFFTH QDYKPKGYTL VVNTTSAGLA
DDHLPANRDI LKQVLDSSKF AFDVIYNKNT PFLNLAKSCS LTCKDGKDML LFQAILSFNI
FYENKFENEK IRSFMQEALF F
|
|---|
| |