Gene CFF8240_1102 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCFF8240_1102 
Symbol 
ID4537856 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCampylobacter fetus subsp. fetus 82-40 
KingdomBacteria 
Replicon accessionNC_008599 
Strand
Start bp1099106 
End bp1099885 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content29% 
IMG OID639746475 
ProductABC transporter, permease protein 
Protein accessionYP_892263 
Protein GI118474975 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1177] ABC-type spermidine/putrescine transport system, permease component II 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTAGAT TATCGAAAAT TTATCATTAT AGCGTTGTTT TAGTGTTATT TCTTATCATA 
GTTTTGCCTA TGGCGGCTAC TTTTATATAC TCGATATCCT CAAGCTGGTC ATCAAATATT
TTACCGGACG GATTTAGTAT TTCTCATTAT AAAGAGCTTT TAAGCGATCC TAGATTTTTA
AAAGCACTTT TAAACTCGCT TTTAGTATGT TTTGCGGCGA TATTTTTAGC TATTTTATTT
TTGTTTCCGG TTGTATTTTG TGCAAATTTT TACTTTTTAA ATTTAAAAAA CGTAATGAGT
TTTATATCTG TTTTACCGTT TGCCATTGCT CCTATCGTGC TTAGCACCGG ACTTTTAAAT
TTATATAGCG ATACTATAAG TGGAACTCCG TATATACTTA TAGGCTGTTA TTTTTGTATC
GCAGTACCTT TTGTATATAG AACTATTGAT AATAATATCG CGGCTTTAAA TTTAAAAGAG
ATAGTTTACT CAAATTATAT TCTTGGAAAC GGTATATTTA GAGCTATTTT TAGAGTAATA
ATTCCAAATT TAAAAGATTC GATACTTATA GCAGTATTTT TATCGTTTTC ATTTTTGATA
GGCGAGTTTT TATATGCAAA TATACTTGCC GGTACGCAGT TTGAAACTCT TCAAGTATAT
CTTTACAATA TAAAAAACAG AAGCGGTCAC GTTTCAAGCG CAGCTATCGT TAGTTATCTG
CTTTTGATAT TTATAGCAAA TTTTATAAGT TCATATATAA GTCACAGAAA AAAGGTTTAA
 
Protein sequence
MSRLSKIYHY SVVLVLFLII VLPMAATFIY SISSSWSSNI LPDGFSISHY KELLSDPRFL 
KALLNSLLVC FAAIFLAILF LFPVVFCANF YFLNLKNVMS FISVLPFAIA PIVLSTGLLN
LYSDTISGTP YILIGCYFCI AVPFVYRTID NNIAALNLKE IVYSNYILGN GIFRAIFRVI
IPNLKDSILI AVFLSFSFLI GEFLYANILA GTQFETLQVY LYNIKNRSGH VSSAAIVSYL
LLIFIANFIS SYISHRKKV