Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CFF8240_1102 |
Symbol | |
ID | 4537856 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter fetus subsp. fetus 82-40 |
Kingdom | Bacteria |
Replicon accession | NC_008599 |
Strand | - |
Start bp | 1099106 |
End bp | 1099885 |
Gene Length | 780 bp |
Protein Length | 259 aa |
Translation table | 11 |
GC content | 29% |
IMG OID | 639746475 |
Product | ABC transporter, permease protein |
Protein accession | YP_892263 |
Protein GI | 118474975 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1177] ABC-type spermidine/putrescine transport system, permease component II |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTAGAT TATCGAAAAT TTATCATTAT AGCGTTGTTT TAGTGTTATT TCTTATCATA GTTTTGCCTA TGGCGGCTAC TTTTATATAC TCGATATCCT CAAGCTGGTC ATCAAATATT TTACCGGACG GATTTAGTAT TTCTCATTAT AAAGAGCTTT TAAGCGATCC TAGATTTTTA AAAGCACTTT TAAACTCGCT TTTAGTATGT TTTGCGGCGA TATTTTTAGC TATTTTATTT TTGTTTCCGG TTGTATTTTG TGCAAATTTT TACTTTTTAA ATTTAAAAAA CGTAATGAGT TTTATATCTG TTTTACCGTT TGCCATTGCT CCTATCGTGC TTAGCACCGG ACTTTTAAAT TTATATAGCG ATACTATAAG TGGAACTCCG TATATACTTA TAGGCTGTTA TTTTTGTATC GCAGTACCTT TTGTATATAG AACTATTGAT AATAATATCG CGGCTTTAAA TTTAAAAGAG ATAGTTTACT CAAATTATAT TCTTGGAAAC GGTATATTTA GAGCTATTTT TAGAGTAATA ATTCCAAATT TAAAAGATTC GATACTTATA GCAGTATTTT TATCGTTTTC ATTTTTGATA GGCGAGTTTT TATATGCAAA TATACTTGCC GGTACGCAGT TTGAAACTCT TCAAGTATAT CTTTACAATA TAAAAAACAG AAGCGGTCAC GTTTCAAGCG CAGCTATCGT TAGTTATCTG CTTTTGATAT TTATAGCAAA TTTTATAAGT TCATATATAA GTCACAGAAA AAAGGTTTAA
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Protein sequence | MSRLSKIYHY SVVLVLFLII VLPMAATFIY SISSSWSSNI LPDGFSISHY KELLSDPRFL KALLNSLLVC FAAIFLAILF LFPVVFCANF YFLNLKNVMS FISVLPFAIA PIVLSTGLLN LYSDTISGTP YILIGCYFCI AVPFVYRTID NNIAALNLKE IVYSNYILGN GIFRAIFRVI IPNLKDSILI AVFLSFSFLI GEFLYANILA GTQFETLQVY LYNIKNRSGH VSSAAIVSYL LLIFIANFIS SYISHRKKV
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