Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CFF8240_1091 |
Symbol | |
ID | 4539145 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter fetus subsp. fetus 82-40 |
Kingdom | Bacteria |
Replicon accession | NC_008599 |
Strand | - |
Start bp | 1090188 |
End bp | 1090976 |
Gene Length | 789 bp |
Protein Length | 262 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 639746464 |
Product | heat-inducible transcription repressor |
Protein accession | YP_892252 |
Protein GI | 118474389 |
COG category | [K] Transcription |
COG ID | [COG1420] Transcriptional regulator of heat shock gene |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.000000000108949 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGGTAG ATAAAAGAGA TCTAATATTA GAATCAATCA TACATGCTTA CTTAGAAGCA AATGAGCCTA TAGGCTCAAG CGAACTTGGA ACGCGTATGA GTACTAGTAT ACCGGCATCT ACGATTAGGG TTTATTTTAA AAAGTTAAGC GATGAGGGAG CTATAACTCA GCTTCACATA AGCGGCGGAC GGATTCCTAC AGTTCCAACT ATGCAGTTTT ACTGGCAAAA TAGACTTAAA TTTGATGATA ATTTTATCAT AAATGATAGT GATATTTTAA ATTTTTTGGT CTATGATTTT GGTATTTACT GTATGATTTT TGGCGCAGGA AAACTAACAT TGAAAGAGAT CTTGAATTTG AAAGATAGAT TTTTAGTTCT GGATTTTGAA AGCGAGAGTA TAGTTATTAA ATTTAATCCT AGAGTAGAGA AATTTTTAAA TAACTTAGTA GGAATTAGTC TTGAAGAGCT TGATAGGATA TCTATACAAG TGGGTCTTAG TGAGCTTAGA GCTAAAATAA AAGAGTTAAA AAGAAGTAGA ATTTACTTCC AAGAAAATGA AAAAGTTGCA TTTGAGATAT GTAAGGATGA GAGGATAAAA ACTATCTTAG ATCCTGCTTT TGAACACTAT TTTAGATCAA ATTTGGCTTT CAAACCGGTT TTTAACTCGG GTTATATGGG GATTAAAACC GATGTTATTT ATGAGGGTAA AAATGCCGTA ATGATCTGTG CTGGTAGTGT TTATAGCGAT TATGAGAAAT TTTTAAATAG TATTAAGGAG GCAGCATGA
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Protein sequence | MKVDKRDLIL ESIIHAYLEA NEPIGSSELG TRMSTSIPAS TIRVYFKKLS DEGAITQLHI SGGRIPTVPT MQFYWQNRLK FDDNFIINDS DILNFLVYDF GIYCMIFGAG KLTLKEILNL KDRFLVLDFE SESIVIKFNP RVEKFLNNLV GISLEELDRI SIQVGLSELR AKIKELKRSR IYFQENEKVA FEICKDERIK TILDPAFEHY FRSNLAFKPV FNSGYMGIKT DVIYEGKNAV MICAGSVYSD YEKFLNSIKE AA
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