| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CFF8240_1029 |
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| Symbol | alaS |
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| ID | 4539434 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Campylobacter fetus subsp. fetus 82-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008599 |
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| Strand | + |
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| Start bp | 1030305 |
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| End bp | 1032842 |
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| Gene Length | 2538 bp |
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| Protein Length | 845 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 639746404 |
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| Product | alanyl-tRNA synthetase |
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| Protein accession | YP_892193 |
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| Protein GI | 118475098 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0013] Alanyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00344] alanine--tRNA ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00361534 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATATTA GAAAAGAATA TTTGGATTTT TTTAAAAGCA AAGGACATGA GATTATAACA
TCGGCTCCCC TAGTACCAGA TGATGCGACC TTACTTTTTA CAAATGCTGG AATGGTACCT
TTTAAAAGTA TTTTTACAGG AGACGTTCCA AGACCAAATC CGCCTATTCG TACAAGCTGT
CAAACCTGCA TAAGGGCCGG CGGAAAACAC AATGATTTAG ACAATGTTGG TTATACAGCG
CGCCACCATA CTTTTTTCGA GATGCTGGGA AATTTCAGCT TTGGCGAATA CTTTAAAAAA
GACGCCATAT CTTACGCGTG GGAGTTTGTC ACAGAAGTGT TAAAGTTACC AAAAGACAAA
CTTTATGTTA CGGTTCATGA AAAAGACGAC GAAGCGTATG AATTATGGCA AAAATTTATA
CAAAAAGATA GAATTTACCG CTTTGGAGAT AAAGATAACT TCTGGGCCAT GGGTGATACT
GGACCTTGTG GACCTTGTAG TGAGATATTT TATGATCAAG GAAGTGAGCA TTTTAACAGC
GATGAAGACT ATATGGGTGG TGATGGAGAT AGATTTTTAG AAATTTGGAA CCTTGTATTT
ATGCAGTTTG AAAGAAGCAA AGACGGCACT ATGACTCCTC TTCCAAAGCC TTCTATAGAC
ACAGGAATGG GGCTTGAGAG AGTTACGGCT ATAAAAGAAG ATAAATTTAG CAACTACGAC
AGCTCGCTAT TTATGCCTCT TATTAACGAA GTTGCAAAGC TTTGTCATAA GCAGTACGAG
TATAAAACAG GAGCTAGCTA TAGAGTGATC AGCGATCATA TCCGCTCTGT TACGTTTTTA
CTAGCTCAAG GCGTAAATTT TGACAAAGAA GGACGCGGAT ATGTATTAAG ACGTATATTA
AGAAGAGCCG TTCGCCACGG ATACTTACTT GGTATAAAAG AACCGTTTAT GTATAAACTA
GTTGATAAAG TAGTAGAGCT AATGGGCGAA CACTACTCGT ATCTAAAAGA GAAAAAAGAG
TATGTAAAAG AGCTTATAAA ACTTGAAGAA GAGAGATTTT TAGCTACTAT AGTAGCGGGG
CTTGATCTAT TTAACGAAGA GCTAGCAAAA ACCTCTAGCA ACGTCTTTAG CGGCGAAGTA
GCATTTAAAC TATACGATAC TTACGGATTT CCGCTTGATC TAACTGCTGA TATGTTAAGA
GAAAAAGGAC TTAGCGTAGA CGAAGCTAAA TTTGACGCTC TTATGAATGA GCAAAAAGCA
CGCGCAAAAG CTAGCTGGAA AGGTAGCGGA GACGCCGCAA AAGAGAGCGG AGACTTTAAA
ACCTTACTTG AAGAATTTGG AGAAAATAAA TTTATAGGAT ATGATAATCT AAAAAGCAGT
AGCAAAGTTT TAGCACTTTT AAATAGCGAA TTTAAAAGAG TAAATGAGTT AAAAAACGGT
GAAATCGGAT ACGTGATGCT AGACTCTACT CCATTTTATG CACAAAGCGG CGGACAGTGT
GGAGACACCG GTATGTTAGG TGAAAATCAA GCTCTTGATA CTAAAAAGTA TTTCGGTCTA
AATTTAAGCA TGATAGAAGC AAAAAACAGC ATAAAAATAG GCGATATAGT ACTTTGTGAA
GTTAGCTTAA ATAGACTAGA GATTCGCCGT CACCACTCAG CCACTCACCT ACTTCAAGCA
GCACTTAGAA ACGTCTTAGG TGCTCATATA GCTCAAGCCG GAAGTAGCGT AGAAGCCGAT
AAGCTTAGAT TTGACTTCTC TCATCCAAAA CCAGTAACAA AAGAAGAATT AGAAAAAATC
GAAAATTTCG TAAATGAAGC GATCTTAAAA GGTGCACCAG CAAAGATAGA AATTATGGAT
ATACAAAATG CTAAGAAAAG CGGAGCTATA GCTCTATTTG GTGAAAAATA CGCAGATAAA
GTCAGGGTAT TAACACTTGG CCCATCAAAA GAGCTTTGTG GAGGAACTCA CGTAGAAAAT
TTAAATGAGA TAGGAAGTTT TTTTATCGTC CGTGAAAGCG GAGTAAGCGC AGGAGTAAGG
CGTATAGAAG CGGTTTGTTC TAAAGCGGCA CTTGAGCTAT CAAAAGAGTT CAGAAAAGAG
ATAAACGATA TAAAAGATAG TTTAAAAGGT GCAGATCCGT TGCTTTCTAT AAAAAAGCTA
AAAGATGAGA TAAAATCACT TCAAAACGAT CTAAAAAACG CTTCAAATAC AAAAGATTTA
GACGTGAAAG ATATAAACGG CGTAAAGGTT GTAGTATCTA AATTTGATGG AGATATAAAA
AGCAAAATAG ATGAACTAAA AAATAAATTT GATAAAGTAG TCGTATTTTT AGCCGGTGTA
AAAGACGGCA AAGTAAGCTT AGGATCAGGA AGCAAAAACA CAAGCATAAA AGCCGGAGAA
TTAGTAAAAA CAGTGGCTCC TATAGTCGGT GGAGGCGGAG GCGGAAGAGA TGATTTTGCC
ACTGCCGGAG GTAAAGATGA AAGCAAAATA GACGAAGCTC TAAATGCTGC TACTAAATTT
ATAAGTGAGA AACTTTGA
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| Protein sequence | MDIRKEYLDF FKSKGHEIIT SAPLVPDDAT LLFTNAGMVP FKSIFTGDVP RPNPPIRTSC
QTCIRAGGKH NDLDNVGYTA RHHTFFEMLG NFSFGEYFKK DAISYAWEFV TEVLKLPKDK
LYVTVHEKDD EAYELWQKFI QKDRIYRFGD KDNFWAMGDT GPCGPCSEIF YDQGSEHFNS
DEDYMGGDGD RFLEIWNLVF MQFERSKDGT MTPLPKPSID TGMGLERVTA IKEDKFSNYD
SSLFMPLINE VAKLCHKQYE YKTGASYRVI SDHIRSVTFL LAQGVNFDKE GRGYVLRRIL
RRAVRHGYLL GIKEPFMYKL VDKVVELMGE HYSYLKEKKE YVKELIKLEE ERFLATIVAG
LDLFNEELAK TSSNVFSGEV AFKLYDTYGF PLDLTADMLR EKGLSVDEAK FDALMNEQKA
RAKASWKGSG DAAKESGDFK TLLEEFGENK FIGYDNLKSS SKVLALLNSE FKRVNELKNG
EIGYVMLDST PFYAQSGGQC GDTGMLGENQ ALDTKKYFGL NLSMIEAKNS IKIGDIVLCE
VSLNRLEIRR HHSATHLLQA ALRNVLGAHI AQAGSSVEAD KLRFDFSHPK PVTKEELEKI
ENFVNEAILK GAPAKIEIMD IQNAKKSGAI ALFGEKYADK VRVLTLGPSK ELCGGTHVEN
LNEIGSFFIV RESGVSAGVR RIEAVCSKAA LELSKEFRKE INDIKDSLKG ADPLLSIKKL
KDEIKSLQND LKNASNTKDL DVKDINGVKV VVSKFDGDIK SKIDELKNKF DKVVVFLAGV
KDGKVSLGSG SKNTSIKAGE LVKTVAPIVG GGGGGRDDFA TAGGKDESKI DEALNAATKF
ISEKL
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