| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CFF8240_0990 |
|---|
| Symbol | hsdM |
|---|
| ID | 4538136 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter fetus subsp. fetus 82-40 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008599 |
|---|
| Strand | - |
|---|
| Start bp | 993446 |
|---|
| End bp | 994951 |
|---|
| Gene Length | 1506 bp |
|---|
| Protein Length | 501 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 639746369 |
|---|
| Product | type I restriction-modification system, M subunit |
|---|
| Protein accession | YP_892158 |
|---|
| Protein GI | 118474825 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG0286] Type I restriction-modification system methyltransferase subunit |
|---|
| TIGRFAM ID | [TIGR00497] type I restriction system adenine methylase (hsdM) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.555022 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAAAATG CAGTCACTTT AGAAAAAACA ACCAAAAAAA CGATAGAAAA CATCATCTGG
AAAGCTTGTG ATACTTTTCG CGGTACGATG GACGGAAGCA ATTATAAAGA TTATATCCTT
ACTATGCTTT TTGTCAAGTA TCTATCTGAC TTTTACAAAG AAAAACTAGA ACTTCTAAAA
GCCGAGTATG GCGATAAACT TGAACGTATA GAAGCCAAGC TTAAAAAAGA GAAATTTAGA
CTTGATGAGT CTTGCACGTT TGATTATTTT ATAGCCAACA AAGAAGCATC AAACCTTGGA
GAAATCATAA ATAAAGCTCT TGAAAAGATA GAAGAAGACA ACAGACAAAA GTTAAATGGG
ATATTTCGCA ATATAGATTT TAATAGTACC GCTATCCTTG GCGACACAAA ACAAAGAAAT
ATCATACTTA AAAATCTCAT AGAAGATTTT AGCGATGATA GACTTGATCT GCGTCCATCT
ATGCTAGAAA ACAACGACAT CATAGGCGAT GTTTATGAGT ATCTTATAGC GCACTTTGCT
AGCAATGCAG GCAAAAAGGG CGGTGAGTTT TACACTCCTA GCGAGGTTTC AACTCTCCTA
GCTAAGCTTG TAAATCCGCA AGAAGGAGAT ATGATATACG ATCCTACTTG TGGTAGCGGC
TCACTGCTTA TCAAGGTTTC AAAAGAGATA CATAGTAAAA ATTTCCGTCT TTACGGACAA
GAAAAAAACG GACAAACTCA TGCGCTTTGC AAGATGAATA TGTTTTTGCA CGAGATAAAT
GATGCGGTTA TCGAGTGGGG CGATACGATA CGAAATCCCT TGCACTTGCA AAATAATCTT
CTTAAAACAT TTGATATAGT TGTGGCAAAT CCACCATTTA GCCTAGATAA ATGGGGTGAA
GAGATAGCGA GTGGCGATAG TTTTGGAAGA TTTAAATTTG GTATCCCGCC AAAGAGCAAG
GGGGACTATG CTTTTGTACT TCATATGCTA AGCTCACTAA ACTCACATGG TACGATGGGT
GTTATCTTGC CTCACGGTGT ACTTTTTAGA GGTTCTAGCG AGGGTAAGAT CCGCCAAAAA
CTCATAGAAC AAAATTTGCT AGATGCCATC ATAGGACTGC CTGCAAATTT ATTTTATGGT
ACTGGGATAC CTGCTTGTAT CATGATATTT AAGAAAAACC GCACAAATAA TGATGTGCTT
TTCATAGATG CGAGTAGTGA ATTTTACAAA GATAAAAACC AAAACAGGCT AAATGACGCC
CTTATCGCTA AAATCGCAAA AACATATAAC GACAGAATAA GCGTAGATAA ATACGCCTAT
CTAGCCACTA TTGAACAGAT CGAGCAAAAT GATTACAACC TAAATATACC AAGGTATGTA
GATACGTACG AAGAAGAAAA GCCTATCGAC ATACAAGCTA CAAAAGACGA GATAAAACGC
ATCGAAAACG AGCTAAATTT AGTTCAAAAC AAGATGACCG CATATCTAAA GGAGCTTGGG
TTATAA
|
|---|
| Protein sequence | MQNAVTLEKT TKKTIENIIW KACDTFRGTM DGSNYKDYIL TMLFVKYLSD FYKEKLELLK
AEYGDKLERI EAKLKKEKFR LDESCTFDYF IANKEASNLG EIINKALEKI EEDNRQKLNG
IFRNIDFNST AILGDTKQRN IILKNLIEDF SDDRLDLRPS MLENNDIIGD VYEYLIAHFA
SNAGKKGGEF YTPSEVSTLL AKLVNPQEGD MIYDPTCGSG SLLIKVSKEI HSKNFRLYGQ
EKNGQTHALC KMNMFLHEIN DAVIEWGDTI RNPLHLQNNL LKTFDIVVAN PPFSLDKWGE
EIASGDSFGR FKFGIPPKSK GDYAFVLHML SSLNSHGTMG VILPHGVLFR GSSEGKIRQK
LIEQNLLDAI IGLPANLFYG TGIPACIMIF KKNRTNNDVL FIDASSEFYK DKNQNRLNDA
LIAKIAKTYN DRISVDKYAY LATIEQIEQN DYNLNIPRYV DTYEEEKPID IQATKDEIKR
IENELNLVQN KMTAYLKELG L
|
|---|
| |