Gene CFF8240_0983 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCFF8240_0983 
SymbolispG 
ID4539389 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCampylobacter fetus subsp. fetus 82-40 
KingdomBacteria 
Replicon accessionNC_008599 
Strand- 
Start bp985610 
End bp986680 
Gene Length1071 bp 
Protein Length356 aa 
Translation table11 
GC content38% 
IMG OID639746362 
Product4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 
Protein accessionYP_892151 
Protein GI118475323 
COG category[I] Lipid transport and metabolism 
COG ID[COG0821] Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis 
TIGRFAM ID[TIGR00612] 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.686382 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAAGAT ACCCTACAAA ACAAATTTTA GTCGGAAATG TCAAGATAGG CGGCGATGCT 
CCTATCAGTG TTCAGTCTAT GACATTTGCA AAAACTAGAG ATGTGAAAGA GTGCTTAGAG 
CAGATAAATA GGCTTTATTT TGCAGGTTGT GATATAGTTC GTTGCGCAGT GTTTAACAAA 
GAAGATATTG TTGGTCTTGA ACAGGTAAAA AAAGAGAGTC CGTTGCCTAT AGTAGCTGAT 
ATACACTTTA ATTATAGCTA TGCTGTGGCT GTTTCTAAAT TTGTAGATGC TATTAGGATA 
AATCCTGGGA ATATCGGTGG AAAAGATAGG ATAAAAGCTG TCGTGGAAGC ATGTAAAGAG 
CGAAATATTC CTATTAGAAT AGGCGTAAAC TCAGGTAGTC TTGAAGAGCA GTTTGAAAAT 
AAATACGGAC GCAGCGTAAA AGGTATGGTG CAAAGCGCTT TATATAACAT AGGATTACTT 
GAAGAGCTTG AATTTACCGA TATCGCAGTG AGTTTAAAGT CTAGTGACGT GTATAATACC 
ATGCAAGCTT ATAGAGAGCT TCGTCCATTT ACTTCATATC CGTTTCATCT CGGAGTTACT 
GAAGCAGGGA CTACTTTTCA TGCAACTATA AAATCAGCTA TCGCTCTAGG AGGTTTGCTG 
CTCGAGGGTA TCGGCGATAC GATGAGAGTT AGTATAACAG GTGAGCTTGA AGAGGAGATA 
AAAGTTGCTC GCGCCATACT TCAAGATACC GGACTTCAAA AATCAGGATT AAATATCATA 
TCTTGTCCTA CTTGTGGAAG ACTACAAAGC GATCTTGTGA GTGCTATAAA AATAGTTGAA 
GAAAAAACTA AGCATATAAA AGAACCTTTA AATGTAAGCG TGATGGGATG TGTGGTAAAT 
GCGATAGGAG AAGCAAAAGG AGCTGATGTT GCTATAGCTT TTGGTAAAGG AAATGGACTG 
GTGATGAGGC ACGGTGAAGT CGTAGCAAGA CTAAAAGAGC ATGAGCTAGT AGATAGATTT 
TTAAGTGAAA TAGATGATGA GATCAAGCAA AGGGCTAGTA ATAATGGCTG A
 
Protein sequence
MQRYPTKQIL VGNVKIGGDA PISVQSMTFA KTRDVKECLE QINRLYFAGC DIVRCAVFNK 
EDIVGLEQVK KESPLPIVAD IHFNYSYAVA VSKFVDAIRI NPGNIGGKDR IKAVVEACKE 
RNIPIRIGVN SGSLEEQFEN KYGRSVKGMV QSALYNIGLL EELEFTDIAV SLKSSDVYNT 
MQAYRELRPF TSYPFHLGVT EAGTTFHATI KSAIALGGLL LEGIGDTMRV SITGELEEEI 
KVARAILQDT GLQKSGLNII SCPTCGRLQS DLVSAIKIVE EKTKHIKEPL NVSVMGCVVN 
AIGEAKGADV AIAFGKGNGL VMRHGEVVAR LKEHELVDRF LSEIDDEIKQ RASNNG