| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CFF8240_0943 |
|---|
| Symbol | |
|---|
| ID | 4538424 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter fetus subsp. fetus 82-40 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008599 |
|---|
| Strand | - |
|---|
| Start bp | 946203 |
|---|
| End bp | 948776 |
|---|
| Gene Length | 2574 bp |
|---|
| Protein Length | 857 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 639746324 |
|---|
| Product | chaperone ClpB |
|---|
| Protein accession | YP_892113 |
|---|
| Protein GI | 118475028 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0542] ATPases with chaperone activity, ATP-binding subunit |
|---|
| TIGRFAM ID | [TIGR03346] ATP-dependent chaperone ClpB |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.000000133749 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAAATA TATTTGAAGA ATTAACCGAT CAAACTAGAA GTTTGGTTGA AAATTCACTG
AGCCTTGCTA TAGGCAATAA AAACCCAGAA GCCTTGAGCT TGCACATGCT TTGGGCATTA
GTCGCAGATA GTAACTCTAT ACTAAATCAA ATTTTTAATA AAACAAACGT AAGCAAGGAC
GCGGTTTTGC TTGACATAAA AAGTCGCGCT TCTAAACTCC TTACTAGCTC AAACGTTAGT
AGAGAAAATA TCAAAGTTTC AAGCGAACTC GTAAATAGCT TAGAAAATGC AAAAGCCGTT
ATGATAAGCT TAGGAGATAG TTATATCGCT GTTGATACTT GGATTTTAGG TAACCTTGAT
AAAGAGCCTT TGAAAGAAAT TTTAAGTAAA TACATAAATT TAATAGAGCT TAAAAAAGAG
CTAGAAGCCA TTCGCGGTGG TCGCAATGTA GATAGTCAAA CTAGCGATGA AACTCTTGAT
AGCCTTTCTA AATTTGGAGT GGATCTTACT AAAAAAGCAA GCGAAGGAGA GCTTGATCCT
GTTATCGGAA GAGATGAAGA GATAACTAGG ATGATGCAAA TTCTCATACG TAAAACTAAA
AATAACCCTA TCTTGCTAGG TGAGCCAGGA GTAGGAAAAA CTGCTATAGT AGAAGGTTTG
GCTCAGCTTA TCATCAAAAA AGCTGTTCCT ACTAGTCTTG CAAACAAACG CGTCATCGCT
CTTGATATGA GTGCCCTCAT CGCCGGAGCA AAATACCGTG GTGAGTTTGA AGACCGTCTC
AAAGCAGTCA TCGACGAAGT AAAAAAAGCA GGGAATATCA TACTTTTTAT AGACGAAATT
CACACTATCG TAGGAGCTGG AGCTAGTGAG GGCAGTATGG ACGCCGCAAA TATCCTAAAA
CCGGCTCTTG CTAGAGGCGA GCTTCACGCC GTGGGAGCTA CTACTCTTAA AGAGTATCGT
AAGTATTTTG AAAAAGACGC AGCCCTTCAG CGTCGTTTCC AGCCAGTAAA TGTTGCCGAG
CCGAGCGTAA ATGAAGCTTT GCAAATTTTA CGTGGTATCA AAGACAAGCT AGAAGTTCAT
CATAACGTAA ATATCACAGA TAGCGCTCTT GTGGCTGCTG CAAAGCTAAG CGATAGATAT
ATAAGCGGTA GATTTTTACC GGATAAAGCT ATAGACTTGA TCGATGAAGC CGCAGCCGAG
CTTAAAATGC AGATCGAAAG CGAACCTTAT GAGCTTTCAA AGGCTAAAAG AGAGATCGAA
ACTCTAAGAG TCGAAAAAGA AGCTTTAAAA ATGGAAAATA GTGATAAAAA TAGCGAACGT
CTTAATGAGA TAGAAAAAGA GGTTGCAAAT TTAAATGAGA AAAAATCCGG ACTAGAAGCT
AAATTTAAAA ATGAAAAAGC GGTATTTAAC GGTATAAGCG AAGCCAAAAA ACAGATAGAA
AGTCTTAAAA ATGAAGCCGA ACTTGCAAAA AGAAATAACG CTTATGAAAA AGCCGCAGAG
ATAGAGTACG GTAAGATCCC AGAAGCAAGC GCTAAGATAA AAGAGTTAGA AGCTAAATGG
GAAGAGATGA AAAAAGGCGG GGTTTTGCTT AAAAACGAAG TTGATGAGGA TATGGTAGCG
GGTATTCTTA GTAAATGGAC TGGAATTTCA GTAAAACGTA TGCTAACTAG CGAAAAAGAG
AAATTCTTGC AAGTAGAAGA GCATCTAAAG CGTAACGTAG TAGGACAAGA CGCTGCGCTT
CACGCTCTTT CACGCGCCAT AAAACGAAAC AAAGCAGGGC TCAGCAGTCA AAATAGACCG
ATCGGTAGCT TTTTGTTTTT AGGACCGACT GGAGTTGGTA AAACAGAGAG CGCAAAGGCG
TTAGCTAGAT TTTTATTTGA TGATGAAAAG GCTCTTGTTC GTTTTGATAT GAGTGAATAT
ATGGAAAAAC ACAGCGTTTC AAGGCTGCTT GGAGCGCCTC CTGGATACGT TGGGTATGAT
GAGGGCGGAC AATTAACCGA AGCAGTTCGT AGAAAACCTT ATAGCGTGAT ACTTTTTGAT
GAAGTTGAAA AGGCTCATAA AGACGTGTTT AATGTACTGC TTGGGATTTT AGATGATGGA
AGGGCGACAG ATAACAAAGG CGTTACCGTG GATTTTAAAA ATACTATCAT CATTTTGACT
AGCAATATCG GTTCGTCTGC GATAGCAAAT TTAAGTGGAG ATGAGAGAGA AAATGCGGTA
AAAGACGCGT TAAAAGACTA TTTTAAACCT GAGTTTTTAA ATAGACTAGA TGATACGATC
ATCTTTAATC CTCTTGGTGC AAACGAGCTT AGCGGCATAG TTTCTATAAT GTTTAAAGAA
CTAGAGGCCA CTCTTCAAAA CAGAGGCATT AAAGCAGTTC TTGATGAAAA TGCTAAAGAG
TTTATCGCTA AAGCGGGATT TGATCCGGTG TATGGTGCGC GTCCGCTTAG AAGGGCTCTT
TATGAGTTAG TCGAAGATAA ACTTGCTGAA ATGATACTAC GCGATGAGTT AAAAAGCGGC
GACAGTATAA AAATATCTGC ACTTAATGAT GAAATAGTCG TAAATCTTAT ATAA
|
|---|
| Protein sequence | MANIFEELTD QTRSLVENSL SLAIGNKNPE ALSLHMLWAL VADSNSILNQ IFNKTNVSKD
AVLLDIKSRA SKLLTSSNVS RENIKVSSEL VNSLENAKAV MISLGDSYIA VDTWILGNLD
KEPLKEILSK YINLIELKKE LEAIRGGRNV DSQTSDETLD SLSKFGVDLT KKASEGELDP
VIGRDEEITR MMQILIRKTK NNPILLGEPG VGKTAIVEGL AQLIIKKAVP TSLANKRVIA
LDMSALIAGA KYRGEFEDRL KAVIDEVKKA GNIILFIDEI HTIVGAGASE GSMDAANILK
PALARGELHA VGATTLKEYR KYFEKDAALQ RRFQPVNVAE PSVNEALQIL RGIKDKLEVH
HNVNITDSAL VAAAKLSDRY ISGRFLPDKA IDLIDEAAAE LKMQIESEPY ELSKAKREIE
TLRVEKEALK MENSDKNSER LNEIEKEVAN LNEKKSGLEA KFKNEKAVFN GISEAKKQIE
SLKNEAELAK RNNAYEKAAE IEYGKIPEAS AKIKELEAKW EEMKKGGVLL KNEVDEDMVA
GILSKWTGIS VKRMLTSEKE KFLQVEEHLK RNVVGQDAAL HALSRAIKRN KAGLSSQNRP
IGSFLFLGPT GVGKTESAKA LARFLFDDEK ALVRFDMSEY MEKHSVSRLL GAPPGYVGYD
EGGQLTEAVR RKPYSVILFD EVEKAHKDVF NVLLGILDDG RATDNKGVTV DFKNTIIILT
SNIGSSAIAN LSGDERENAV KDALKDYFKP EFLNRLDDTI IFNPLGANEL SGIVSIMFKE
LEATLQNRGI KAVLDENAKE FIAKAGFDPV YGARPLRRAL YELVEDKLAE MILRDELKSG
DSIKISALND EIVVNLI
|
|---|
| |