| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CFF8240_0940 |
|---|
| Symbol | |
|---|
| ID | 4538308 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter fetus subsp. fetus 82-40 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008599 |
|---|
| Strand | - |
|---|
| Start bp | 943744 |
|---|
| End bp | 944895 |
|---|
| Gene Length | 1152 bp |
|---|
| Protein Length | 383 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 639746321 |
|---|
| Product | quinone-reactive Ni/Fe-hydrogenase small chain |
|---|
| Protein accession | YP_892110 |
|---|
| Protein GI | 118474859 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1740] Ni,Fe-hydrogenase I small subunit |
|---|
| TIGRFAM ID | [TIGR00391] hydrogenase (NiFe) small subunit (hydA)
[TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.0025548 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTTGAGC ACAAACTCTT AAATACCATA CAAGATAGAC TAGACTCTTT ATCAAAGATG
CCTAAAATCA AAAAAAATAG CTCAATAGCC CAAGCGCTTA AAGAAAACGG CTTTACCCGT
AGAGACTTTA TGAAATGGGC TGGAGCTATG ACGGCACTTA TGGCTCTTCC GGCTAGTTTT
GCTCCGGTTG TTGCAAAAGC AGCTGAGCTT GCAGATAGAC TTCCGGTTAT TTGGTTGCAT
ATGGCAGAAT GTACAGGATG TAGTGAGAGT CTTTTAAGGA CAGATGCTCC AACTATAGAT
AGTTTGATAT TTGATTATAT CAGCCTTGAG TATCATGAGA CCGTTATGGC TGCTTCTGGA
TGGCAAGCTG AAGAGAATCT TGAAAATGCC ATAGAGAAAT ATAAAGGAAA ATATGTTTTA
ATGGTAGAAG GCGGAATACC CGATGGAGAT AGCTCGTTTT ATCTAACAGT TGGACCAAAA
GGCACTACTG GAAGAGAGCA CGCTATACAT GCTAGTGATA ATGCTTTGGC GATATTTGCT
ATTGGTACCT GTTCGAGTTT TGGAGGCATA CAAGCAGCAA GACCAAACCC AACAAATGCA
AGACCGCTTC ATAAAATTAC AAACAAACCT GTTATAAATG TGCCCGGTTG TCCGCCAAGC
GAGAAAAATA TCGTAGGAAA TGTTTTAAAT TTCTTACTAT TTGGAACGCT TCCTGCGCTT
GATGTATATA ATCGTCCAAA ATGGGCTTAC GGTCTTAGAA TCCATGATCT TTGCGAGAGG
CGCGGTCATT TTGATGCTGG AGAGTTTGTA CAAGAATTTG GCGATGATGG TGCAAAAAAT
GGTTATTGTT TATACAAAGT AGGCTGCAAA GGACCATATA CATTTAATAA CTGCTCACGC
GAAAGATTTA ATCAACATAC AAGCTGGCCT ATCCAAGCAG GTCATGGTTG TATAGGTTGT
TCCGAGCCTG ATTTTTGGGA TAAAATGGGA CCTTTTGAAA AGCCTCTTGG AGATAGATTA
TACGAAACGG TATTTGAGGG ACTTGGAGCA GACGCTATAA CTGATAAAAT AGGTATAGGT
GTATTAGCTA TAACAGGAGT TGCTATAGCG GCTCACGCTT TGATATCAAC AGCTACAAAA
GATAAGGAGT AA
|
|---|
| Protein sequence | MVEHKLLNTI QDRLDSLSKM PKIKKNSSIA QALKENGFTR RDFMKWAGAM TALMALPASF
APVVAKAAEL ADRLPVIWLH MAECTGCSES LLRTDAPTID SLIFDYISLE YHETVMAASG
WQAEENLENA IEKYKGKYVL MVEGGIPDGD SSFYLTVGPK GTTGREHAIH ASDNALAIFA
IGTCSSFGGI QAARPNPTNA RPLHKITNKP VINVPGCPPS EKNIVGNVLN FLLFGTLPAL
DVYNRPKWAY GLRIHDLCER RGHFDAGEFV QEFGDDGAKN GYCLYKVGCK GPYTFNNCSR
ERFNQHTSWP IQAGHGCIGC SEPDFWDKMG PFEKPLGDRL YETVFEGLGA DAITDKIGIG
VLAITGVAIA AHALISTATK DKE
|
|---|
| |