| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CFF8240_0857 |
|---|
| Symbol | |
|---|
| ID | 4538146 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter fetus subsp. fetus 82-40 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008599 |
|---|
| Strand | + |
|---|
| Start bp | 862029 |
|---|
| End bp | 863699 |
|---|
| Gene Length | 1671 bp |
|---|
| Protein Length | 556 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 32% |
|---|
| IMG OID | 639746243 |
|---|
| Product | atpase ec atp-dependent Zn protease |
|---|
| Protein accession | YP_892032 |
|---|
| Protein GI | 118475540 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0465] ATP-dependent Zn proteases |
|---|
| TIGRFAM ID | [TIGR01241] ATP-dependent metalloprotease FtsH |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAATTA TGCGGAAATT TGAATTTAAT TTAAATAAAA AAATTTGGGT TATAGCGGCA
GGAACTATTT TAATAGTTCT TCTTGGTGTA GTTTTTTTTA GAAATATTCC AAAATATATA
AGTTTAATGC AATATGATAA TTTTTTGCAA TCAAACTCTA TCCAAAGTGC GGTTATAGAT
GGAGAAAAGA TTGTTATAAA AGCTGGAAGT CAGAACTATT ATGTTGTAAA AGACTCCATA
AATTTAAACG AATTAGGTCA AAAAGTTCCT TTGAAAGTTA GCAGCGATTA TAGTATTTTA
GAGAATTTGT TGCTCATTAT TATATTTCTT GTTATGTTTG TTTTTGGATT AAAATACTTT
AAAAAAGCTA ATTTAAATTA TAAAAAAAGC TCCACAACAG ATACAAATGA TTTAAACCAA
ATAGTTAGCT CGGATGTTGC TCCTGCTATA TCAAATGTTA TGTTTAAAGA TGTTGCTGGG
ATAAATGACG TAAAATTAGA GTTAATGGAG ATAGTGGATT TTTTGAAAAA TCCAAAAGCG
TACCAAGAAC TCAGTATAAA AATGCCAAAA GGCGTTTTAA TGGTAGGACC TCCGGGAGTA
GGTAAAACTC TTATAGCAAA AGCAGTCGCA GGAGAAGCTA ATGTACCATT TTTCTATCAA
AGCGGTGCAA GTTTTGTACA AATTTATGTA GGAATGGGTG CAAAAAGAGT TAGAGAGCTG
TTTTCAAAAG CAAAAGCATA TGCACCAAGT ATTATATTTA TAGATGAAAT AGATGCAGTT
GGCAAGGCTA GAGGCGGCGG TAGAAACGAT GAAAGAGAGG CTACTTTAAA CCAGCTATTA
ACAGAGATGG ATGGATTTAC CGATAATAGC GGCGTTATAG TTATAGCAGC TACAAATAAA
ATAGAGATGA TAGATGAAGC TCTACTTAGA AGCGGTCGTT TTGATAGAAG GATATTTTTA
AGTTTGCCGG ACTGCAAAGA TAGAATGGCG ATACTAAAGT CTTATCTAAA AGATAAAAAA
CATGAAGTAG ATATAGATAC TGTAGCAAAA AACACCACAG GATTTAGCGG AGCAGGACTA
GCAACTCTTG TAAATGAAGC AGCTATAAAT GCTCTTAGAA ATCACAGAGT TATCATTCAA
AACGATGATT TTAAAGCTGT GGAAAATAGA GTTTTATACG GTAAAAAGAA AATTTACTCT
TTGAGTCAAA GTGAAAAAGA AATTCAAGCT CTATATCAAG GAGCTAAAGC ACTTAGTGCC
GAGTGGTTTG GTATAGATTT TGATAAGATA TCTTTGCTTG AAGATAGATT TTTATCTCAA
GATGGTTTCT TAGAGTCTAA GACTATGATT TTATCTCGTA TAAAGGTATA TTTAGCAGGT
AGCGTAGCAC TGAAAATTTA TAAAAATGAG CTATATACTA ATTCAAGTAA TGATATATTA
AATGCGAGAG AACTTGCTAA AAAACTTGTT ATAGACTACG CTATGACCGG AAATCTTATG
GCGACAAATA ACGATATAAA AGATATTTTA GATGAGTGTT TAAATGAGAC GGCTGAGCTT
ATAAAAGGCA TACAAAAAGA ACTTTTTGCA CTTAGTAGCT ATCTAGTGGA TAATGAAAGC
GTAGATAGAG AGACTATAAA AGATATGATA AGGAAGATAC ATGAAAGCTA A
|
|---|
| Protein sequence | MKIMRKFEFN LNKKIWVIAA GTILIVLLGV VFFRNIPKYI SLMQYDNFLQ SNSIQSAVID
GEKIVIKAGS QNYYVVKDSI NLNELGQKVP LKVSSDYSIL ENLLLIIIFL VMFVFGLKYF
KKANLNYKKS STTDTNDLNQ IVSSDVAPAI SNVMFKDVAG INDVKLELME IVDFLKNPKA
YQELSIKMPK GVLMVGPPGV GKTLIAKAVA GEANVPFFYQ SGASFVQIYV GMGAKRVREL
FSKAKAYAPS IIFIDEIDAV GKARGGGRND EREATLNQLL TEMDGFTDNS GVIVIAATNK
IEMIDEALLR SGRFDRRIFL SLPDCKDRMA ILKSYLKDKK HEVDIDTVAK NTTGFSGAGL
ATLVNEAAIN ALRNHRVIIQ NDDFKAVENR VLYGKKKIYS LSQSEKEIQA LYQGAKALSA
EWFGIDFDKI SLLEDRFLSQ DGFLESKTMI LSRIKVYLAG SVALKIYKNE LYTNSSNDIL
NARELAKKLV IDYAMTGNLM ATNNDIKDIL DECLNETAEL IKGIQKELFA LSSYLVDNES
VDRETIKDMI RKIHES
|
|---|
| |