Gene CFF8240_0791 details

Gene Information

• Locus tag: CFF8240_0791
• ID: 4539444
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Campylobacter fetus subsp. fetus 82-40
• Kingdom: Bacteria
• Replicon accession: NC_008599
• Strand: +
• Start bp: 801778
• End bp: 803652
• Gene Length: 1875 bp
• Protein Length: 624 aa
• Translation table: 11
• GC content: 36%
• IMG OID: 639746177
• Product: putative ATP-dependent RNA helicase RhlE
• Protein accession: YP_891966
• Protein GI: 118475108
• COG category: [J] Translation, ribosomal structure and biogenesis; [K] Transcription; [L] Replication, recombination and repair
• COG ID: [COG0513] Superfamily II DNA and RNA helicases

Plasmid Coverage information

• Num covering plasmid clones: 4
• Plasmid unclonability p-value: 0.00000437602
• Plasmid hitchhiking: No
• Plasmid clonability: decreased coverage

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTTATTTT CAGATTTCGA TCTCAGCTCT GCTATATTAG AAGCATTAAA AGAGCTAAAT 
TACGACGCTC CTACGCAGAT CCAACAAGTC GCGATACCTG CTATAATGCA AGGAAAAGAT 
ATCTTAGCAG GAGCTAGGAC AGGCACGGGA AAAACTGCTG CATTTGCGCT ACCTATATTA 
GAAAAATTAT CGTCAAAAGA ACGCAACAAA AAGCGTCCTC AAACTCGTGT TTTAGTGCTT 
GTTCCTACAA GAGAACTTGC AAATCAAGTC ACGCAAAACA TCAAATCTTA CGCGAAAAAG 
TTACCGTTTA AAACTTTGCC AGTATTTGGC GGAGTTAGCT CTTACCCACA AATTCAAGCT 
TTAAAAAGTG GTATAGATAT CGTGGTGGCG ACTCCTGGCA GACTTTTGGA TCTTGCTTTG 
CAAAATGCTT TAAGCTTAGA GCATATCGAT ACGCTAGTAT TTGACGAGGC TGATCGTATG 
TTTGATATGG GATTTATCCA CGATATCAAA CAAATAGTAA AAATGCTTCC TGAAAAAAGA 
CAAAATTTAC TATTTTCCGC GACGTATCCA AGTGAGGTTA TGTCGCTTTG TAACTCTATG 
CTAAAAGATC CTTTGCGTAT CCAAATAGAA GAGCAAAACA GCACTGCTTT AAATATCATA 
CAACGCGTGA TTTTAGTAGA TCGAGATAAA AAAATGGAGC TTTTAAACGA GGTTTTTGGA 
GTGGAGAGTA TAGATCAAGC TTTGGTTTTT ACTCGTACCA AAAGAAGTGC GGATAAATGT 
TCATCTTATC TACATACTTT AGGCTTTAGC GTAGCTGCTT TGCATGGAGA TAAAAGTCAA 
AGCGTGCGTT CAAAAACACT TGAGAAATTT AAAAACGGTA AAACAAAAAT TCTTGTAGCA 
ACGGATATAG CAGCGCGCGG ATTAGACATA AAAGAACTTC CGTTTGTTAT AAATTTAGAG 
CTTCCAAATG TGCCTGAGGA TTATGTTCAT AGGATAGGTA GAACAGGACG CGCCGGAAAT 
GATGGCGTTG CGATATCTTT GGTTTGCGTT GATGAGTTTA AGTTTTTAAT CGATATTGAA 
AAATTGATCG ATAAAAAACT AATAAGAGAA AGCTTTAGCG GATTTGAAGC CGATCTAAGA 
GTAAAACCTC AGCCTATCAG ACGTGGACAA AATATGAACA AAAGCTCAGA ACGAGATGAC 
AGAAACGGAA ATAAAATAGA TAAAAAAGAG AGAAAGCCAA GAGAGTTTAA TAGCGATAAA 
AAAGACGAGT CAAAACGCGG TAGAAATAGA GATGATTTTA AGGGTGAATT TAGGGACAGA 
CCAAAAAAAG ACGATAAAAG AAAATTTGAT GATAAGAGAT CTAAATTCGG CTTTGATAAA 
GACTTTGGCA CAGATGAGCG CGAGACGAAA AAAGACGGCG ATTTTAAACG TAAATTTAAA 
AAAGACGAGT CAAAACGCGA ATACAGAAGA GATGGTGTCA AGAGTGAATT TTCAAAAGAC 
AAAAAGGAAT TTTCTAAAAA TAGTCGCGCA AAAGATTCAA ATAGTAGTTT TGATGGCGAA 
GCAAAAAGAG AATTCAAATT TAAAAAAGAC GATAAAAAAT TTGGCGAGAA AAAGAAATCT 
TTCGGCGATA AAAAATCTTT TGATGACAAA GACAAAAAAT TTAGCGGCGA AAAGAAATTT 
AGCTCTGATA AAAAGCCTAG AAGTAGTGAC AAAAGTTCTG ATGAAAAATA TTCTGGTAAT 
AAATTTAGCC CGAAAAAGAA ATTTGGAAGT GACAAACCAG ACAGAGGCGA TAAATTTACT 
AAAGACGCTC CAAAGCCAAG AGCTTCAAGC AGACCACGCA AACCACAATC TGATAAAAAA 
TCCACTACAA AATAG 

 

Protein sequence

MLFSDFDLSS AILEALKELN YDAPTQIQQV AIPAIMQGKD ILAGARTGTG KTAAFALPIL 
EKLSSKERNK KRPQTRVLVL VPTRELANQV TQNIKSYAKK LPFKTLPVFG GVSSYPQIQA 
LKSGIDIVVA TPGRLLDLAL QNALSLEHID TLVFDEADRM FDMGFIHDIK QIVKMLPEKR 
QNLLFSATYP SEVMSLCNSM LKDPLRIQIE EQNSTALNII QRVILVDRDK KMELLNEVFG 
VESIDQALVF TRTKRSADKC SSYLHTLGFS VAALHGDKSQ SVRSKTLEKF KNGKTKILVA 
TDIAARGLDI KELPFVINLE LPNVPEDYVH RIGRTGRAGN DGVAISLVCV DEFKFLIDIE 
KLIDKKLIRE SFSGFEADLR VKPQPIRRGQ NMNKSSERDD RNGNKIDKKE RKPREFNSDK 
KDESKRGRNR DDFKGEFRDR PKKDDKRKFD DKRSKFGFDK DFGTDERETK KDGDFKRKFK 
KDESKREYRR DGVKSEFSKD KKEFSKNSRA KDSNSSFDGE AKREFKFKKD DKKFGEKKKS 
FGDKKSFDDK DKKFSGEKKF SSDKKPRSSD KSSDEKYSGN KFSPKKKFGS DKPDRGDKFT 
KDAPKPRASS RPRKPQSDKK STTK