| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CFF8240_0780 |
|---|
| Symbol | |
|---|
| ID | 4538352 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter fetus subsp. fetus 82-40 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008599 |
|---|
| Strand | - |
|---|
| Start bp | 790822 |
|---|
| End bp | 791454 |
|---|
| Gene Length | 633 bp |
|---|
| Protein Length | 210 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 33% |
|---|
| IMG OID | 639746166 |
|---|
| Product | amino-acid ABC transporter permease protein YckJ |
|---|
| Protein accession | YP_891955 |
|---|
| Protein GI | 118475743 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
|---|
| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATAAGAG GAGCGGTGCA ATACACCATT CCTCTTAGCC TAATATCCTT TATCTTAGGT
ATTAGCATCG GTATCATGGT AGCCCTTATA AGAATCGATT CAAGTAAAAA TTTACTCACA
ACTATTTTAA AATATATCTG TGCATTTTAT ATATCAATAA TAAGAGGAAC TCCTCTTCTC
GTACAACTTT TCATCATATT TTATGGACTA CCGAATATAG GTATAACTTT AAATCCGTTT
ATAAGCTCAA TTATAGCTTT TAGCTTAAAT ATTGGTGCAT ACTCTAGTGA AACTATAAGA
GCTAGCATTT TAGCAGTTCC AAAAGGACAG TGGGAAGCTG GTTGGAGCAT AGGTATGAAC
AACTTTGATA CATTTACAAA AATAATAGCT CCGCAAGCAT TTAAAATAGC TTTGCCAACA
CTCTCAAATA CATTTATTAG CCTTGTAAAA GACAGCTCTT TAGCATCAGT AGTGCTCGTA
GCTGAGTTAT TTAGAGAGGC TCAAACTATA GCTTCTCAAA ATTATGAGTT TTTACTTACT
TATTCAGAAG CCGCATTAAT ATATTGGGTC ATATGCATAT TTTTAGGCTA TTTACAAACA
AAACTTGAGA TTAAATTCAG CAAACATTTA TAG
|
|---|
| Protein sequence | MIRGAVQYTI PLSLISFILG ISIGIMVALI RIDSSKNLLT TILKYICAFY ISIIRGTPLL
VQLFIIFYGL PNIGITLNPF ISSIIAFSLN IGAYSSETIR ASILAVPKGQ WEAGWSIGMN
NFDTFTKIIA PQAFKIALPT LSNTFISLVK DSSLASVVLV AELFREAQTI ASQNYEFLLT
YSEAALIYWV ICIFLGYLQT KLEIKFSKHL
|
|---|
| |