Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CFF8240_0764 |
Symbol | |
ID | 4538154 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter fetus subsp. fetus 82-40 |
Kingdom | Bacteria |
Replicon accession | NC_008599 |
Strand | - |
Start bp | 776425 |
End bp | 777840 |
Gene Length | 1416 bp |
Protein Length | 471 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 639746150 |
Product | peptidase S1C, Do |
Protein accession | YP_891939 |
Protein GI | 118475548 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
TIGRFAM ID | [TIGR02037] periplasmic serine protease, Do/DeqQ family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.000251476 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAATAAAC TAACGATTAT TTCTATAATA ACAGCCGCAA GTCTATTTGG CGCAGATGTT AAATTTAGTG ATGCAAATAA CAACTACGCA AGAGTAAATC CAAGTGCAGA TGCAAATACT GTTTTATCAT ATCACAGCTC TATAGAAAAA GCTAAAAAAT CTGTAGTAAA TATATCAACA TCGAAAACTA TAAAAGTAAA AAACAATCTA AATAGTCTAA TGGACGATCC GTTTTTTAAA GAATTTTTTG GATTTAACTT CAAAACTCCA AAAGAAAGAA GTCAAAAAGC AACGTCTTTA GGATCCGGAG TAATCATCTC AAACGATGGA TATATAGTCA CAAACTATCA TGTAGTCGAA GATAGCGATG AGATCATAGT AACATTGCTT GATAATTCAA AAGAGTATAA AGCAAAAGTA GTCGGCATAG ATCCAAAAAC AGATCTTGCT ATTATAAAAA TAGATGCTAA AAACTTTCAA GCTATAAGTT TTGCCGATAG TTCAAAACTT CTTGAAGGAG ACCTTGTATT TGCTATAGGA AATCCATTTG GCGTAGGCGG AAGTATAACA AGCGGAATTA TTTCAGGGTT GAATAAAGAT AATATAGGAT TAAACCAATA TGAAGATTTC ATACAAACAG ACGCTAGCAT AAATCCGGGA AATAGCGGTG GAGCGCTGGT AGATAGCAGA GGAGCATTAG TCGGTATAAA CTCTGCCATT CTTAGCAGAA GCGGCGGAAA TAACGGCATT GGGTTTGCTA TTCCATCGAA TATGGTAAAA ACAATAGCGC AAAAACTAAT CTCAGATGGA AAAATCACAC GCGGATATAT AGGCGTTATG ATATCAAATT TAACCGATGA TCAAAAAGAA ATTTATACAA ACAAAGAAGG TGCTTTAGTA ACAAACGTAG AAAAAGATAA ACCAGCCGAC ATAGCAGGTC TTAAAAGAGG AGACCTTATA ATAAAAGTTG GAAATCAAAC GATAAAAAAC GCAAATGATC TAAAAAATCT CATAGGATCA TTAGAACCGA ACAAAGAGAT AAAAATAACG TTTGAAAGAT CAAATCAGAT AAAAGATACA ACATTAAAAC TAGCAAATAT GGACTCAGGC TATATAGATC CAAAAGATGC GTACTTAACA GACGGACTTA GTTTACAAAA TTTAAGCGAT GAAATAAGAT ATAAATTCCA AATTCCAAAA GATATAAAAG GAATCATAAT TACAAATGTT AAAGATGATT CAAATGCTGC AAATGCAGGC TTTGAAGCAG GAGATATAAT CGTTCAAGTG AATGAAAAAA TAATATATAA CGTAGATGAT TTCACAAAAG AGATAAAATC AAGCAAAGCT CAAAACAAAA AACCTATCAT TTGGATAAAC AGAAGCGGCG TATTGATGGG ATTAGTACTA AAATAA
|
Protein sequence | MNKLTIISII TAASLFGADV KFSDANNNYA RVNPSADANT VLSYHSSIEK AKKSVVNIST SKTIKVKNNL NSLMDDPFFK EFFGFNFKTP KERSQKATSL GSGVIISNDG YIVTNYHVVE DSDEIIVTLL DNSKEYKAKV VGIDPKTDLA IIKIDAKNFQ AISFADSSKL LEGDLVFAIG NPFGVGGSIT SGIISGLNKD NIGLNQYEDF IQTDASINPG NSGGALVDSR GALVGINSAI LSRSGGNNGI GFAIPSNMVK TIAQKLISDG KITRGYIGVM ISNLTDDQKE IYTNKEGALV TNVEKDKPAD IAGLKRGDLI IKVGNQTIKN ANDLKNLIGS LEPNKEIKIT FERSNQIKDT TLKLANMDSG YIDPKDAYLT DGLSLQNLSD EIRYKFQIPK DIKGIIITNV KDDSNAANAG FEAGDIIVQV NEKIIYNVDD FTKEIKSSKA QNKKPIIWIN RSGVLMGLVL K
|
| |