| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CFF8240_0758 |
|---|
| Symbol | |
|---|
| ID | 4539248 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter fetus subsp. fetus 82-40 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008599 |
|---|
| Strand | + |
|---|
| Start bp | 768761 |
|---|
| End bp | 769945 |
|---|
| Gene Length | 1185 bp |
|---|
| Protein Length | 394 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 639746144 |
|---|
| Product | macrolide-specific efflux protein MacA |
|---|
| Protein accession | YP_891933 |
|---|
| Protein GI | 118475587 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0845] Membrane-fusion protein |
|---|
| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.0225012 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAT GGATAGCAGC TGCAGCTGTT TTGGTGGCTA TTTTTGGTTT TTGGTACTAT
CAAAATTCCA AAAAACCAGA AAATGAGTAT CTAACAACTA TAGTAAAAAA AGGAAATTTA
ACCCAAAGCG TAGAAGCCGT AGGCGAGGTT TTTGCGGAGA ATTTAGTAGA TGTTGGAGCT
CAAGTAAGTG GACAAATAAA AGAACTTTAT GTAAAAGTTG GAGATAAAGT TAAAAAAGGC
GATAAAATCG CTCAAATAGA CTCTATAAAA CAGCAAAATA CGCTAGATCA ACAATTAGCA
GCTCTTGAGA TACTAAATGC TAAGCTAAAA TCAGCTAAAA TTTCTTTAAA CATAGCTGAA
ATTCAGTATA ATCGTGAACT AAGACTAGCA GAACAAAATG CAACATCTGT TGAAAATTTA
GAAAACTATA AAAATACTCT AAGTCTTCAA AACGCAAGTT TAAAAGAGAT AGAAGCCCAA
ATAAAACAGA CTCAAATAGA AATAAGTACG GCCAGAACAA ATTTAAACTA TACGGATATT
AGAGCTCCGT TTGATGGAGT TGTAGTTTCT GTGCCAGTAG AGGTCGGACA AACTTTAAAT
GCGAATCAAA CAACTCCGAC TTTGGTAAAT ATAGCCGATC TTAGCAAAAT GGAAATTAGA
ATGCAAATAA GCGAGGGCGA CGTACCCAAG ATAAGCATAG GTGATAGAGT AGAATACACC
ATTCTTTCGG ATATAAATAA AAAATATACA GGATCTCTTA CATCTATAGA TCCCGGTCTT
ACTACGCTAA GTGATGGAAA ATATAAAACC ACAAGCTCTA GTTCAGGTTC AAGCTCTAGT
TCGGGTAGTT CGGCAGTGTA TTATTATGCA AAATTAAAAG TCGATAATTC AAGTGAGTTT
TTAAGAATCG GTATGACGAC GCAAAATACT ATAATAATAA AAGAGATAAA AGATACTCTT
TTACTTCCTA CGATGGCTAT AAAAAGTGAT GAAAACGGTA ATTTTGTTCT TATAAAAAAC
GGTGAAGAGA TAAAAAAAGT AAGAGTAGAG GTGGGTATTA GTAGCAGTGT TGATACTCAA
ATTCTAAGCG GGTTAAGCGA GGGAGATGAA GTAGTTACGT CTCAACTTGG CGGCGATGAA
TTAAAAAAAC TTTTAAATAC TAGATCACCA AAGATAAGAG TATGA
|
|---|
| Protein sequence | MKKWIAAAAV LVAIFGFWYY QNSKKPENEY LTTIVKKGNL TQSVEAVGEV FAENLVDVGA
QVSGQIKELY VKVGDKVKKG DKIAQIDSIK QQNTLDQQLA ALEILNAKLK SAKISLNIAE
IQYNRELRLA EQNATSVENL ENYKNTLSLQ NASLKEIEAQ IKQTQIEIST ARTNLNYTDI
RAPFDGVVVS VPVEVGQTLN ANQTTPTLVN IADLSKMEIR MQISEGDVPK ISIGDRVEYT
ILSDINKKYT GSLTSIDPGL TTLSDGKYKT TSSSSGSSSS SGSSAVYYYA KLKVDNSSEF
LRIGMTTQNT IIIKEIKDTL LLPTMAIKSD ENGNFVLIKN GEEIKKVRVE VGISSSVDTQ
ILSGLSEGDE VVTSQLGGDE LKKLLNTRSP KIRV
|
|---|
| |