Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CFF8240_0733 |
Symbol | |
ID | 4538175 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter fetus subsp. fetus 82-40 |
Kingdom | Bacteria |
Replicon accession | NC_008599 |
Strand | + |
Start bp | 739508 |
End bp | 741052 |
Gene Length | 1545 bp |
Protein Length | 514 aa |
Translation table | 11 |
GC content | 30% |
IMG OID | 639746119 |
Product | diguanylate cyclase |
Protein accession | YP_891908 |
Protein GI | 118475090 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.057951 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAAGTA TAGTAAGTGA AGTTATAAAA GATGTTATTT TAGAGGCAAA TTCAAAAAAG ATAGTTCTAA CTCCGGACAA TTATCATATG CTTTTTTGTG AAGCAGCTAG AAGAAGAGGC GTATCGGTAG AAGACTGCAA AAAACTAGAA AAATATATTT CAAAGCTTGA TAAAATGTAT CAAGATGAGC TAAAAAAGAT GAATGTGAGA AATTTAGACG AGCTTTTTGC ATTTATTAGT TCACGATTAA ATCGTATAAA TCCAAGCGAT TTTACTAAAC TTACTCAAGC TTTTACTCTG CTTACAAAGC GTATTTTACA GAGTATAAGC TTACTTCATA ACAAGCAAGC AAGAAACCTG GCAAATATAA GCGTACAGAC TATTGATAAA AAAATTAGCA TAGAAAATAT CAATATTATA AAAGATAAGT GGTTTAACTT TTTAAGCGAC TATAATGATG ATTATCTAAA AAAACTAGAA CAGTACGGTA TAAAAAATAG CGATGACTTA GAAGGTATTG TAAGCAAACT TTTAAATGCT AAATTTACTC CAAGCAGTGA AGATAAGGAT TACACAAAAC TTGCCGAGCT TATGATAGCT GCTTTAGTAC CGTCGATAGC TTCTAGTATG AACGATGAAT TAGCAGCTAT AAGCGATGAG ATAAGAGCCA AACCGGAGCT TTTGCAAAGC GATGGAATGC AAAACGATAT TAAAAAATTT ATTTTGAAAA GAGTTGATTT AGATAAAAGC GAAGTAAAGC AAAAGATCGT TATTTTAGAT AGAATTTTAG ATGATATCAA TGAGCAAATA AAGTATTTTA TATCAAGAGT TGCTCAAAAT GAAAACGGTA TAAGCAGTAT AAAAACGGAT TTAGATAATA TAAGGTCTAA TGATGATTAT ATTGTTGTTA AAGAGAAGCT TTTGCATGTA TCTAATTCGC TTGAGTTTGA GATAAAAGAT TTTTTAGCTA AACTTATAGA GGATAAAAAA ACTATTTCTA ACCTAAAAGC TAGAGTAAAA GAGTTAGAAG ATATGCTTTT GCAAGCAAAA GAAGAGATAA GCAGCGATTA TCTTACAAAC GTAGGAACAA AAAGAGCTTT TGAAATCGAA TTGGCTAATA TAGAAGATGT ATATAAAAGA TATAAAATAG ACTACTCTAT ATGCTTTTTC GACATAGATC ATTTTAAGAT AGTAAATGAT AATTATGGTC ATGAAGCAGG TGATACTATC TTATCTACTG TCGGCAAAAT ACTAAAAAAA CAGTCAAGAG ATATTGATTT TGTAGGTAGA TACGGAGGAG AAGAGTTTGT TGTTATTATG CCAGAAACAT CAAAAGACAA TGCGATTTTG TTTGCAAAAA ATATCTTATC AAATATATCG AATTTTAAAT TTTTATATAG AGGTGAAGAT ATAGACATAA CAATTAGTTG CGGAGTGGCT TCAAGAAAAG ATAGTAAAAG CGACAGAGAT ACTCTTGAAA GAGCAGATTC TCATCTATAT GAAGCTAAAA ATAGTGGTAG AAATTGCGTA AGGCCAAGTG TTTAA
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Protein sequence | MASIVSEVIK DVILEANSKK IVLTPDNYHM LFCEAARRRG VSVEDCKKLE KYISKLDKMY QDELKKMNVR NLDELFAFIS SRLNRINPSD FTKLTQAFTL LTKRILQSIS LLHNKQARNL ANISVQTIDK KISIENINII KDKWFNFLSD YNDDYLKKLE QYGIKNSDDL EGIVSKLLNA KFTPSSEDKD YTKLAELMIA ALVPSIASSM NDELAAISDE IRAKPELLQS DGMQNDIKKF ILKRVDLDKS EVKQKIVILD RILDDINEQI KYFISRVAQN ENGISSIKTD LDNIRSNDDY IVVKEKLLHV SNSLEFEIKD FLAKLIEDKK TISNLKARVK ELEDMLLQAK EEISSDYLTN VGTKRAFEIE LANIEDVYKR YKIDYSICFF DIDHFKIVND NYGHEAGDTI LSTVGKILKK QSRDIDFVGR YGGEEFVVIM PETSKDNAIL FAKNILSNIS NFKFLYRGED IDITISCGVA SRKDSKSDRD TLERADSHLY EAKNSGRNCV RPSV
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